PDB: 1f7u Compound: arginyl-trna synthetase Classification: LIGASE/RNA Entry date in PDB: 2001-06-27 Resolution [Å]: 2.20 R-Factor: 0.190

CHAIN: A SWISS-PROT/TREMBL: Q05506    KEYWORD: 3D-structure    Aminoacyl-tRNA synthetase    ATP-binding    Ligase    Protein biosynthesis    EC: 6.1.1.19 SCOP: a.27.1.1 All alpha proteins    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases    Arginyl-tRNA synthetase (ArgRS)    Baker's yeast (Saccharomyces cerevisiae) SCOP: c.26.1.1 Alpha and beta proteins (a/b)    Adenine nucleotide alpha hydrolase-like    Nucleotidylyl transferase    Class I aminoacyl-tRNA synthetases (RS), catalytic domain    Arginyl-tRNA synthetase (ArgRS)    Baker's yeast (Saccharomyces cerevisiae) SCOP: d.67.2.1 Alpha and beta proteins (a+b)    RRF/tRNA synthetase additional domain-like    Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain    Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain    Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain    Baker's yeast (Saccharomyces cerevisiae) GO:

Image Source: PDB

Loops in ArchDB40 clusters

1f7u_A_163 - HE => SUBCLASS : 1.1.1
1f7u_A_51 - HE => SUBCLASS : 1.2.8
1f7u_A_299 - HE => SUBCLASS : 2.4.1
1f7u_A_347 - HE => SUBCLASS : 3.1.1
1f7u_A_446 - HE => SUBCLASS : 5.1.1
1f7u_A_260 - HE => SUBCLASS : 5.3.2
1f7u_A_315 - HA => SUBCLASS : 2.1.1
1f7u_A_100 - HA => SUBCLASS : 2.3.1
1f7u_A_471 - EH => SUBCLASS : 1.1.4
1f7u_A_366 - EH => SUBCLASS : 1.1.10
1f7u_A_335 - EH => SUBCLASS : 7.13.1
1f7u_A_397 - AR => SUBCLASS : 5.21.1
1f7u_A_418 - HH => SUBCLASS : 1.1.47
1f7u_A_194 - HH => SUBCLASS : 2.1.23
1f7u_A_534 - HH => SUBCLASS : 2.4.3
1f7u_A_31 - HH => SUBCLASS : 3.1.1

Loops in ArchDB95 clusters

1f7u_A_366 - EH => SUBCLASS : 1.1.10
1f7u_A_471 - EH => SUBCLASS : 2.2.1
1f7u_A_335 - EH => SUBCLASS : 7.25.1
1f7u_A_397 - AR => SUBCLASS : 4.24.1
1f7u_A_418 - HH => SUBCLASS : 1.1.11
1f7u_A_194 - HH => SUBCLASS : 2.1.16
1f7u_A_534 - HH => SUBCLASS : 2.5.5
1f7u_A_31 - HH => SUBCLASS : 3.1.1
1f7u_A_163 - HE => SUBCLASS : 1.1.1
1f7u_A_51 - HE => SUBCLASS : 1.3.8
1f7u_A_299 - HE => SUBCLASS : 2.4.1
1f7u_A_299 - HE => SUBCLASS : 2.4.2
1f7u_A_347 - HE => SUBCLASS : 3.1.1
1f7u_A_347 - HE => SUBCLASS : 3.3.1
1f7u_A_260 - HE => SUBCLASS : 5.3.1
1f7u_A_446 - HE => SUBCLASS : 5.25.2
1f7u_A_315 - HA => SUBCLASS : 2.1.1
1f7u_A_100 - HA => SUBCLASS : 2.3.1

Loops in ArchDB-EC clusters

1f7u_A_31 - HH => SUBCLASS : 3.1.1

Loops not clustered in ArchDB

1f7u_A_397 - AR
1f7u_A_69 - EH
1f7u_A_405 - EH
1f7u_A_290 - EH
1f7u_A_182 - EH
1f7u_A_144 - EH
1f7u_A_109 - EH
1f7u_A_59 - HA
1f7u_A_321 - HA
1f7u_A_59 - HA
1f7u_A_100 - HA
1f7u_A_315 - HA
1f7u_A_321 - HA
1f7u_A_376 - HE
1f7u_A_116 - HE
1f7u_A_83 - HE
1f7u_A_547 - HH
1f7u_A_522 - HH
1f7u_A_508 - HH
1f7u_A_486 - HH
1f7u_A_475 - HH
1f7u_A_437 - HH
1f7u_A_240 - HH
1f7u_A_216 - HH
1f7u_A_209 - HH
1f7u_A_19 - HH
1f7u_A_3 - HH
1f7u_A_246 - HH

1bs2 A - percentage of sequence identity: 100
1f7v A - percentage of sequence identity: 100