PDB: 1fmb Compound: eiav protease Classification: HYDROLASE (ACID PROTEINASE) Entry date in PDB: 1996-10-14 Resolution [Å]: 1.80 R-Factor: 0.136

CHAIN: - SWISS-PROT/TREMBL: P11204    KEYWORD: 3D-structure    Aspartyl protease    Endonuclease    Hydrolase    Metal-binding    Nuclease    Polyprotein    RNA-directed DNA polymerase    Transferase    Zinc    Zinc-finger    EC: 2.7.7.49 SCOP: b.50.1.1 All beta proteins    Acid proteases    Acid proteases    Retroviral protease (retropepsin)    EIAV protease    Equine infectious anemia virus GO:  aspartic-type endopeptidase activity    DNA binding    integrase activity    nucleic acid binding    ribonuclease H activity    RNA binding    RNA-directed DNA polymerase activity    zinc ion binding    DNA integration    DNA recombination    dUTP metabolism    proteolysis and peptidolysis    RNA-dependent DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1fmb_*_10 - HA => SUBCLASS : 2.1.2
1fmb_*_63 - HA => SUBCLASS : 2.1.4
1fmb_*_10 - HA => SUBCLASS : 2.1.4
1fmb_*_48 - AR => SUBCLASS : 3.12.1
1fmb_*_18 - AR => SUBCLASS : 4.9.1
1fmb_*_18 - AR => SUBCLASS : 6.2.1

Loops in ArchDB95 clusters

1fmb_*_48 - AR => SUBCLASS : 3.12.1
1fmb_*_18 - AR => SUBCLASS : 4.7.1
1fmb_*_74 - AR => SUBCLASS : 5.12.1
1fmb_*_10 - HA => SUBCLASS : 2.1.4
1fmb_*_63 - HA => SUBCLASS : 2.1.4
1fmb_*_63 - HA => SUBCLASS : 2.1.6

Loops in ArchDB-EC clusters

1fmb_*_10 - HA => SUBCLASS : 2.4.4

Loops not clustered in ArchDB

1fmb_*_74 - AR
1fmb_*_58 - AR
1fmb_*_48 - AR
1fmb_*_18 - AR
1fmb_*_58 - AR
1fmb_*_89 - EH
1fmb_*_32 - EH
1fmb_*_10 - HA
1fmb_*_53 - HA
1fmb_*_53 - HA
1fmb_*_63 - HA
1fmb_*_35 - HE

2fmb - - percentage of sequence identity: 100