PDB: 1fxl Compound: paraneoplastic encephalomyelitis antigen hud Classification: TRANSCRIPTION/RNA Entry date in PDB: 2001-02-05 Resolution [Å]: 1.80 R-Factor: 0.192

CHAIN: A SWISS-PROT/TREMBL: P26378    KEYWORD: 3D-structure    Alternative splicing    Antigen    Repeat    RNA-binding    SCOP: d.58.7.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RNA-binding domain, RBD    Canonical RBD    Hu antigen D (Hud)    Human (Homo sapiens) SCOP: d.58.7.1 Alpha and beta proteins (a+b)    Ferredoxin-like    RNA-binding domain, RBD    Canonical RBD    Hu antigen D (Hud)    Human (Homo sapiens) GO:  nucleic acid binding    nucleotide binding    RNA binding

Image Source: PDB

Loops in ArchDB40 clusters

1fxl_A_138 - HE => SUBCLASS : 2.9.1
1fxl_A_90 - HE => SUBCLASS : 3.12.1
1fxl_A_104 - HA => SUBCLASS : 2.3.1
1fxl_A_151 - HA => SUBCLASS : 6.1.2
1fxl_A_65 - HA => SUBCLASS : 6.1.2
1fxl_A_79 - EH => SUBCLASS : 2.1.1
1fxl_A_165 - EH => SUBCLASS : 2.1.1
1fxl_A_40 - EH => SUBCLASS : 7.3.1
1fxl_A_126 - EH => SUBCLASS : 7.3.1

Loops in ArchDB95 clusters

1fxl_A_79 - EH => SUBCLASS : 2.1.1
1fxl_A_165 - EH => SUBCLASS : 2.1.1
1fxl_A_40 - EH => SUBCLASS : 7.5.1
1fxl_A_126 - EH => SUBCLASS : 7.5.1
1fxl_A_138 - HE => SUBCLASS : 2.8.3
1fxl_A_90 - HE => SUBCLASS : 3.8.1
1fxl_A_104 - HA => SUBCLASS : 2.3.1
1fxl_A_151 - HA => SUBCLASS : 6.2.2
1fxl_A_65 - HA => SUBCLASS : 6.2.2

Loops not clustered in ArchDB

1fxl_A_108 - AR
1fxl_A_111 - AR
1fxl_A_52 - HE
1fxl_A_176 - HE

1fnx H - percentage of sequence identity: 92
1g2e A - percentage of sequence identity: 100