PDB: 1gdn Compound: trypsin Classification: HYDROLASE Entry date in PDB: 2001-02-07 Resolution [Å]: 0.81 R-Factor: 0.108

CHAIN: A SWISS-PROT/TREMBL: P35049    KEYWORD: 3D-structure    Hydrolase    Serine protease    Signal    Zymogen    EC: 3.4.21.4 SCOP: b.47.1.2 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Eukaryotic proteases    Trypsin(ogen)    Mold (Fusarium oxysporum) GO:  chymotrypsin activity    serine-type peptidase activity    trypsin activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB40 clusters

1gdn_A_39 - HA => SUBCLASS : 2.2.38
1gdn_A_30 - HA => SUBCLASS : 2.4.10
1gdn_A_226 - EH => SUBCLASS : 0.1.4
1gdn_A_51 - EH => SUBCLASS : 1.1.1
1gdn_A_156 - EH => SUBCLASS : 1.1.8
1gdn_A_156 - EH => SUBCLASS : 1.1.14
1gdn_A_180 - AR => SUBCLASS : 16.2.1

Loops in ArchDB95 clusters

1gdn_A_226 - EH => SUBCLASS : 0.1.2
1gdn_A_51 - EH => SUBCLASS : 1.1.1
1gdn_A_156 - EH => SUBCLASS : 1.1.8
1gdn_A_180 - AR => SUBCLASS : 16.1.1
1gdn_A_39 - HA => SUBCLASS : 2.2.28
1gdn_A_30 - HA => SUBCLASS : 2.5.5

Loops not clustered in ArchDB

1gdn_A_20 - AR
1gdn_A_104 - AR
1gdn_A_63 - HA
1gdn_A_81 - HA
1gdn_A_135 - HA
1gdn_A_198 - HA
1gdn_A_209 - HA
1gdn_A_56 - HE
1gdn_A_165 - HE

1fn8 A - percentage of sequence identity: 100
1fy4 A - percentage of sequence identity: 100
1fy5 A - percentage of sequence identity: 100
1gdq A - percentage of sequence identity: 100
1gdu A - percentage of sequence identity: 100
1ppz A - percentage of sequence identity: 100
1pq5 A - percentage of sequence identity: 100
1pq8 A - percentage of sequence identity: 100
1pqa A - percentage of sequence identity: 100
1try - - percentage of sequence identity: 100
1xvm A - percentage of sequence identity: 100
1xvo A - percentage of sequence identity: 100