PDB: 1hnf Compound: Cd2 (human) Classification: T LYMPHOCYTE ADHESION GLYCOPROTEIN Entry date in PDB: 1995-02-07 Resolution [Å]: 2.50 R-Factor: 0.193

CHAIN: - SWISS-PROT/TREMBL: P06729    KEYWORD: 3D-structure    Antigen    Cell adhesion    Glycoprotein    Immunoglobulin domain    Polymorphism    Repeat    Signal    T-cell    Transmembrane    SCOP: b.1.1.1 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    V set domains (antibody variable domain-like)    CD2, first domain    Human (Homo sapiens) SCOP: b.1.1.3 All beta proteins    Immunoglobulin-like beta-sandwich    Immunoglobulin    C2 set domains    CD2, second domain    Human (Homo sapiens) GO:  integral to membrane    cell adhesion

Image Source: PDB

Loops in ArchDB40 clusters

1hnf_*_131 - HA => SUBCLASS : 2.1.1
1hnf_*_156 - HA => SUBCLASS : 2.2.1
1hnf_*_131 - HA => SUBCLASS : 2.4.9
1hnf_*_60 - HA => SUBCLASS : 3.1.1
1hnf_*_30 - HA => SUBCLASS : 4.1.2
1hnf_*_110 - HA => SUBCLASS : 4.10.1
1hnf_*_79 - HA => SUBCLASS : 5.1.2
1hnf_*_30 - HA => SUBCLASS : 5.8.1
1hnf_*_140 - AR => SUBCLASS : 3.2.3
1hnf_*_148 - AR => SUBCLASS : 3.2.5
1hnf_*_7 - AR => SUBCLASS : 3.3.2
1hnf_*_7 - AR => SUBCLASS : 4.1.1

Loops in ArchDB95 clusters

1hnf_*_148 - AR => SUBCLASS : 3.1.10
1hnf_*_140 - AR => SUBCLASS : 3.1.14
1hnf_*_7 - AR => SUBCLASS : 3.3.2
1hnf_*_7 - AR => SUBCLASS : 4.1.1
1hnf_*_7 - AR => SUBCLASS : 4.9.1
1hnf_*_53 - AR => SUBCLASS : 4.34.1
1hnf_*_68 - AR => SUBCLASS : 7.1.1
1hnf_*_156 - HA => SUBCLASS : 2.2.1
1hnf_*_60 - HA => SUBCLASS : 3.1.1
1hnf_*_30 - HA => SUBCLASS : 4.1.2
1hnf_*_79 - HA => SUBCLASS : 5.1.1
1hnf_*_79 - HA => SUBCLASS : 5.1.9

Loops not clustered in ArchDB

1hnf_*_17 - AR
1hnf_*_92 - AR
1hnf_*_119 - AR
1hnf_*_43 - HA

1cdb - - percentage of sequence identity: 100
1gya - - percentage of sequence identity: 100
1qa9 A - percentage of sequence identity: 97
1qa9 C - percentage of sequence identity: 97