PDB: 1j9a Compound: oligoribonuclease Classification: HYDROLASE Entry date in PDB: 2003-06-24 Resolution [Å]: 2.50 R-Factor: 0.191

CHAIN: A SWISS-PROT/TREMBL: P45340    KEYWORD: 3D-structure    Complete proteome    Exonuclease    Hydrolase    Nuclease    EC: 3.1.-.- SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Oligoribonuclease    Haemophilus influenzae GO:  intracellular    exonuclease activity

Image Source: PDB

Loops in ArchDB40 clusters

1j9a_A_31 - HA => SUBCLASS : 3.1.1
1j9a_A_107 - EH => SUBCLASS : 3.20.1
1j9a_A_63 - HH => SUBCLASS : 1.3.1
1j9a_A_63 - HH => SUBCLASS : 1.3.6

Loops in ArchDB95 clusters

1j9a_A_107 - EH => SUBCLASS : 3.11.1
1j9a_A_107 - EH => SUBCLASS : 3.11.2
1j9a_A_63 - HH => SUBCLASS : 1.3.1
1j9a_A_31 - HA => SUBCLASS : 3.1.1

Loops in ArchDB-EC clusters

1j9a_A_63 - HH => SUBCLASS : 1.5.1

Loops not clustered in ArchDB

1j9a_A_42 - EH
1j9a_A_134 - EH
1j9a_A_11 - HA
1j9a_A_11 - HA
1j9a_A_31 - HA
1j9a_A_125 - HE
1j9a_A_85 - HE
1j9a_A_55 - HH
1j9a_A_112 - HH
1j9a_A_137 - HH
1j9a_A_74 - HH

1yta A - percentage of sequence identity: 72
1yta B - percentage of sequence identity: 72
1yta C - percentage of sequence identity: 72
1yta D - percentage of sequence identity: 72