PDB: 1jbo Compound: c-phycocyanin alpha chain Classification: PHOTOSYNTHESIS Entry date in PDB: 2003-03-18 Resolution [Å]: 1.45 R-Factor: 0.146

CHAIN: A SWISS-PROT/TREMBL: P50032    KEYWORD: 3D-structure    Bile pigment    Complete proteome    Electron transport    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Phycocyanin alpha subunit    Synechococcus elongatus GO:  light-harvesting complex (sensu Viridiplantae)    phycobilisome    electron transport    photosynthesis    CHAIN: B SWISS-PROT/TREMBL: P50033    KEYWORD: 3D-structure    Bile pigment    Complete proteome    Electron transport    Methylation    Photosynthesis    Phycobilisome    SCOP: a.1.1.3 All alpha proteins    Globin-like    Globin-like    Phycocyanin-like phycobilisome proteins    Phycocyanin beta subunit    Synechococcus elongatus GO:  light-harvesting complex (sensu Viridiplantae)    phycobilisome    electron transport    mannitol transport    photosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1jbo_B_78 - HH => SUBCLASS : 2.4.1
1jbo_A_78 - HH => SUBCLASS : 2.4.1
1jbo_B_105 - HH => SUBCLASS : 2.10.1
1jbo_A_105 - HH => SUBCLASS : 2.10.1
1jbo_A_115 - HH => SUBCLASS : 3.2.3
1jbo_B_115 - HH => SUBCLASS : 3.2.3
1jbo_B_115 - HH => SUBCLASS : 3.3.5
1jbo_B_4 - HH => SUBCLASS : 5.3.3

Loops in ArchDB95 clusters

1jbo_B_78 - HH => SUBCLASS : 2.5.1
1jbo_B_78 - HH => SUBCLASS : 2.5.2
1jbo_A_78 - HH => SUBCLASS : 2.5.2
1jbo_A_105 - HH => SUBCLASS : 2.9.1
1jbo_B_105 - HH => SUBCLASS : 2.9.1
1jbo_A_115 - HH => SUBCLASS : 3.1.4
1jbo_A_115 - HH => SUBCLASS : 3.2.5
1jbo_B_115 - HH => SUBCLASS : 3.2.5
1jbo_A_115 - HH => SUBCLASS : 3.4.4
1jbo_B_115 - HH => SUBCLASS : 3.4.9
1jbo_B_4 - HH => SUBCLASS : 5.1.2
1jbo_A_4 - HH => SUBCLASS : 5.7.2

Loops not clustered in ArchDB

1jbo_A_21 - HH
1jbo_A_48 - HH
1jbo_A_126 - HH
1jbo_B_21 - HH
1jbo_B_34 - HH
1jbo_B_48 - HH
1jbo_B_126 - HH

1cpc A - percentage of sequence identity: 73
1cpc B - percentage of sequence identity: 80
1cpc K - percentage of sequence identity: 73
1f99 K - percentage of sequence identity: 77
1f99 M - percentage of sequence identity: 77
1gh0 A - percentage of sequence identity: 76
1gh0 B - percentage of sequence identity: 81
1gh0 C - percentage of sequence identity: 76
1gh0 E - percentage of sequence identity: 76
1gh0 G - percentage of sequence identity: 76
1gh0 I - percentage of sequence identity: 76
1gh0 K - percentage of sequence identity: 76
1gh0 M - percentage of sequence identity: 76
1gh0 O - percentage of sequence identity: 76
1gh0 Q - percentage of sequence identity: 76
1gh0 S - percentage of sequence identity: 76
1gh0 U - percentage of sequence identity: 76
1gh0 W - percentage of sequence identity: 76
1ha7 A - percentage of sequence identity: 75
1ha7 C - percentage of sequence identity: 75
1ha7 E - percentage of sequence identity: 75
1ha7 G - percentage of sequence identity: 75
1ha7 I - percentage of sequence identity: 75
1ha7 K - percentage of sequence identity: 75
1ha7 M - percentage of sequence identity: 75
1ha7 O - percentage of sequence identity: 75
1ha7 Q - percentage of sequence identity: 75
1ha7 S - percentage of sequence identity: 75
1ha7 U - percentage of sequence identity: 75
1ha7 W - percentage of sequence identity: 75
1i7y A - percentage of sequence identity: 99
1ktp A - percentage of sequence identity: 99
1on7 A - percentage of sequence identity: 99
2c7j A - percentage of sequence identity: 68
2c7k A - percentage of sequence identity: 68
2c7l A - percentage of sequence identity: 68