PDB: 1l3s Compound: DNA polymerase i Classification: TRANSFERASE/DNA Entry date in PDB: 2003-03-25 Resolution [Å]: 1.70 R-Factor: 0.196

CHAIN: A SWISS-PROT/TREMBL: P52026    KEYWORD: 3D-structure    DNA repair    DNA replication    DNA-binding    DNA-directed DNA polymerase    Exonuclease    Hydrolase    Transferase    EC: 2.7.7.7 SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of prokaryotic DNA polymerase    Bacillus stearothermophilus, newly identified strain as yet unnamed SCOP: e.8.1.1 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    DNA polymerase I    DNA polymerase I (Klenow fragment)    Bacillus stearothermophilus, newly identified strain as yet unnamed GO:  intracellular    3'-5' exonuclease activity    5'-3' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nuclease activity    nucleic acid binding    DNA replication

Image Source: PDB

Loops in ArchDB-EC clusters

1l3s_A_681 - HH => SUBCLASS : 8.3.2

Loops not clustered in ArchDB

1l3s_A_601 - AR
1l3s_A_640 - AR
1l3s_A_302 - AR
1l3s_A_831 - EH
1l3s_A_770 - EH
1l3s_A_647 - EH
1l3s_A_617 - EH
1l3s_A_493 - EH
1l3s_A_390 - EH
1l3s_A_367 - EH
1l3s_A_342 - EH
1l3s_A_315 - HA
1l3s_A_334 - HA
1l3s_A_605 - HA
1l3s_A_762 - HA
1l3s_A_823 - HA
1l3s_A_631 - HE
1l3s_A_355 - HE
1l3s_A_373 - HE
1l3s_A_841 - HE
1l3s_A_478 - HE
1l3s_A_589 - HE
1l3s_A_744 - HE
1l3s_A_781 - HE
1l3s_A_718 - HH
1l3s_A_729 - HH
1l3s_A_348 - HH
1l3s_A_699 - HH
1l3s_A_669 - HH
1l3s_A_394 - HH
1l3s_A_410 - HH
1l3s_A_440 - HH
1l3s_A_471 - HH
1l3s_A_497 - HH
1l3s_A_531 - HH
1l3s_A_558 - HH
1l3s_A_569 - HH
1l3s_A_657 - HH
1l3s_A_425 - HH

1l3t A - percentage of sequence identity: 100
1l3u A - percentage of sequence identity: 100
1l3v A - percentage of sequence identity: 100
1l5u A - percentage of sequence identity: 100
1lv5 A - percentage of sequence identity: 99
1lv5 B - percentage of sequence identity: 99
1njw A - percentage of sequence identity: 100
1njx A - percentage of sequence identity: 100
1njy A - percentage of sequence identity: 100
1njz A - percentage of sequence identity: 100
1nk0 A - percentage of sequence identity: 100
1nk5 A - percentage of sequence identity: 100
1nk6 A - percentage of sequence identity: 100
1nk7 A - percentage of sequence identity: 100
1nk8 A - percentage of sequence identity: 100
1nk9 A - percentage of sequence identity: 100
1nkb A - percentage of sequence identity: 100
1nkc A - percentage of sequence identity: 100
1nke A - percentage of sequence identity: 100
1u45 A - percentage of sequence identity: 99
1u47 A - percentage of sequence identity: 99
1u48 A - percentage of sequence identity: 99
1u49 A - percentage of sequence identity: 99
1u4b A - percentage of sequence identity: 99
1ua0 A - percentage of sequence identity: 99
1ua1 A - percentage of sequence identity: 99
1xc9 A - percentage of sequence identity: 100
1xwl - - percentage of sequence identity: 100
2bdp A - percentage of sequence identity: 99
3bdp A - percentage of sequence identity: 99
4bdp A - percentage of sequence identity: 99