PDB: 1lc5 Compound: l-threonine-o-3-phosphate decarboxylase Classification: LYASE Entry date in PDB: 2002-06-28 Resolution [Å]: 1.46 R-Factor: 0.190

CHAIN: A SWISS-PROT/TREMBL: P97084    KEYWORD: 3D-structure    Cobalamin biosynthesis    Complete proteome    Lyase    Pyridoxal phosphate    EC: 4.1.1.81 SCOP: c.67.1.1 Alpha and beta proteins (a/b)    PLP-dependent transferases    PLP-dependent transferases    AAT-like    L-threonine-O-3-phosphate decarboxylase CobD    Salmonella enterica GO:  catalytic activity    transferase activity, transferring nitrogenous groups    biosynthesis    cobalamin biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1lc5_A_165 - HE => SUBCLASS : 1.1.1
1lc5_A_110 - HE => SUBCLASS : 1.1.1
1lc5_A_311 - HE => SUBCLASS : 1.1.3
1lc5_A_85 - HE => SUBCLASS : 3.1.1
1lc5_A_263 - HE => SUBCLASS : 3.13.1
1lc5_A_13 - HE => SUBCLASS : 6.1.1
1lc5_A_62 - HE => SUBCLASS : 6.1.1
1lc5_A_208 - HA => SUBCLASS : 11.1.1
1lc5_A_335 - EH => SUBCLASS : 1.1.60
1lc5_A_226 - EH => SUBCLASS : 2.1.3
1lc5_A_335 - EH => SUBCLASS : 3.8.2
1lc5_A_100 - EH => SUBCLASS : 3.29.1
1lc5_A_121 - EH => SUBCLASS : 8.2.1

Loops in ArchDB95 clusters

1lc5_A_226 - EH => SUBCLASS : 3.3.1
1lc5_A_100 - EH => SUBCLASS : 3.27.1
1lc5_A_121 - EH => SUBCLASS : 8.8.1
1lc5_A_149 - EH => SUBCLASS : 10.3.1
1lc5_A_165 - HE => SUBCLASS : 1.1.1
1lc5_A_110 - HE => SUBCLASS : 1.1.1
1lc5_A_311 - HE => SUBCLASS : 1.1.2
1lc5_A_311 - HE => SUBCLASS : 1.2.1
1lc5_A_85 - HE => SUBCLASS : 3.3.2
1lc5_A_263 - HE => SUBCLASS : 3.7.3
1lc5_A_263 - HE => SUBCLASS : 3.10.1
1lc5_A_62 - HE => SUBCLASS : 6.1.1
1lc5_A_13 - HE => SUBCLASS : 6.1.2
1lc5_A_139 - HE => SUBCLASS : 6.37.1
1lc5_A_208 - HA => SUBCLASS : 11.2.2

Loops in ArchDB-EC clusters

1lc5_A_13 - HE => SUBCLASS : 7.1.1

Loops not clustered in ArchDB

1lc5_A_320 - AR
1lc5_A_320 - AR
1lc5_A_27 - EH
1lc5_A_79 - EH
1lc5_A_299 - EH
1lc5_A_290 - HA
1lc5_A_208 - HA
1lc5_A_181 - HA
1lc5_A_323 - HA
1lc5_A_290 - HA
1lc5_A_181 - HA
1lc5_A_323 - HA
1lc5_A_250 - HH
1lc5_A_233 - HH
1lc5_A_40 - HH

1lc7 A - percentage of sequence identity: 100
1lc8 A - percentage of sequence identity: 100
1lkc A - percentage of sequence identity: 100