PDB: 1nj4 Compound: penicillin-binding protein 5 Classification: HYDROLASE Entry date in PDB: 2003-01-07 Resolution [Å]: 1.90 R-Factor: 0.209

CHAIN: A SWISS-PROT/TREMBL: P04287    KEYWORD: 3D-structure    Carboxypeptidase    Cell wall    Complete proteome    Hydrolase    Inner membrane    Peptidoglycan synthesis    Signal    EC: 3.4.16.4 SCOP: b.105.1.1 All beta proteins    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Penicillin-binding protein 5, C-terminal domain    Escherichia coli SCOP: e.3.1.1 Multi-domain proteins (alpha and beta)    beta-lactamase/transpeptidase-like    beta-lactamase/transpeptidase-like    beta-Lactamase/D-ala carboxypeptidase    Penicillin-binding protein 5, N-terminal domain    Escherichia coli GO:  serine carboxypeptidase activity    serine carboxypeptidase activity    serine carboxypeptidase activity    proteolysis and peptidolysis    proteolysis and peptidolysis    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB-EC clusters

1nj4_A_112 - HH => SUBCLASS : 2.8.1

Loops not clustered in ArchDB

1nj4_A_193 - AR
1nj4_A_262 - AR
1nj4_A_287 - AR
1nj4_A_296 - AR
1nj4_A_309 - AR
1nj4_A_319 - AR
1nj4_A_233 - EH
1nj4_A_96 - EH
1nj4_A_30 - EH
1nj4_A_276 - HA
1nj4_A_221 - HA
1nj4_A_208 - HA
1nj4_A_187 - HA
1nj4_A_328 - HA
1nj4_A_17 - HA
1nj4_A_68 - HA
1nj4_A_250 - HE
1nj4_A_177 - HE
1nj4_A_46 - HE
1nj4_A_162 - HH
1nj4_A_126 - HH
1nj4_A_99 - HH

1hd8 A - percentage of sequence identity: 100
1nzu A - percentage of sequence identity: 99
1sdn A - percentage of sequence identity: 100
1z6f A - percentage of sequence identity: 99