PDB: 1nq7 Compound: nuclear receptor ror-beta Classification: TRANSCRIPTION Entry date in PDB: 2003-09-23 Resolution [Å]: 1.50 R-Factor: 0.201

CHAIN: A SWISS-PROT/TREMBL: P45446    KEYWORD: 3D-structure    DNA-binding    Nuclear protein    Receptor    Transcription regulation    Zinc-finger    SCOP: a.123.1.1 All alpha proteins    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Nuclear receptor ligand-binding domain    Orphan nuclear receptor ROR-beta    Rat (Rattus norvegicus) GO:  nucleus    DNA binding    ligand-dependent nuclear receptor activity    steroid hormone receptor activity    transcription factor activity    regulation of transcription, DNA-dependent

Image Source: PDB

Loops in ArchDB40 clusters

1nq7_A_288 - HE => SUBCLASS : 0.1.25
1nq7_A_317 - HA => SUBCLASS : 2.1.1
1nq7_A_311 - HA => SUBCLASS : 4.1.1
1nq7_A_255 - HH => SUBCLASS : 1.1.3
1nq7_A_255 - HH => SUBCLASS : 1.1.8
1nq7_A_435 - HH => SUBCLASS : 2.1.1
1nq7_A_244 - HH => SUBCLASS : 2.1.1
1nq7_A_336 - HH => SUBCLASS : 3.2.7
1nq7_A_378 - HH => SUBCLASS : 3.5.8

Loops in ArchDB95 clusters

1nq7_A_255 - HH => SUBCLASS : 1.1.3
1nq7_A_255 - HH => SUBCLASS : 1.1.5
1nq7_A_255 - HH => SUBCLASS : 1.2.37
1nq7_A_244 - HH => SUBCLASS : 2.1.1
1nq7_A_435 - HH => SUBCLASS : 2.1.1
1nq7_A_281 - HH => SUBCLASS : 2.1.50
1nq7_A_336 - HH => SUBCLASS : 3.1.6
1nq7_A_356 - HH => SUBCLASS : 10.2.1
1nq7_A_288 - HE => SUBCLASS : 0.1.12
1nq7_A_288 - HE => SUBCLASS : 0.1.33
1nq7_A_288 - HE => SUBCLASS : 0.1.65
1nq7_A_317 - HA => SUBCLASS : 2.1.1
1nq7_A_311 - HA => SUBCLASS : 4.1.1

Loops not clustered in ArchDB

1nq7_A_323 - EH
1nq7_A_209 - HH
1nq7_A_231 - HH
1nq7_A_405 - HH
1nq7_A_413 - HH

1k4w A - percentage of sequence identity: 100
1n4h A - percentage of sequence identity: 100
1s0x A - percentage of sequence identity: 63