PDB: 1p4c Compound: l(+)-mandelate dehydrogenase Classification: OXIDOREDUCTASE Entry date in PDB: 2003-10-28 Resolution [Å]: 1.35 R-Factor: 0.184

CHAIN: A SWISS-PROT/TREMBL: P20932    KEYWORD: Aromatic hydrocarbons catabolism    Flavoprotein    FMN    Mandelate pathway    Oxidoreductase    3D-structure    Acetylation    Flavoprotein    FMN    Glycolate pathway    Oxidoreductase    Peroxisome    Photorespiration    Aromatic hydrocarbons catabolism    Flavoprotein    FMN    Mandelate pathway    Oxidoreductase    EC: 1.-.-.- SCOP: c.1.4.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    FMN-linked oxidoreductases    FMN-linked oxidoreductases    Membrane-associated (S)-mandelate dehydrogenase    Pseudomonas putida GO:  oxidoreductase activity    electron transport

Image Source: PDB

Loops in ArchDB40 clusters

1p4c_A_64 - HA => SUBCLASS : 2.1.1
1p4c_A_227 - EH => SUBCLASS : 2.1.4
1p4c_A_126 - EH => SUBCLASS : 4.15.2
1p4c_A_281 - EH => SUBCLASS : 5.26.1
1p4c_A_105 - EH => SUBCLASS : 7.27.1
1p4c_A_8 - HH => SUBCLASS : 2.1.3
1p4c_A_8 - HH => SUBCLASS : 2.1.7

Loops in ArchDB95 clusters

1p4c_A_227 - EH => SUBCLASS : 2.1.2
1p4c_A_126 - EH => SUBCLASS : 3.3.11
1p4c_A_281 - EH => SUBCLASS : 5.44.1
1p4c_A_105 - EH => SUBCLASS : 7.20.1
1p4c_A_47 - AR => SUBCLASS : 13.7.1
1p4c_A_8 - HH => SUBCLASS : 2.1.1
1p4c_A_8 - HH => SUBCLASS : 2.3.1
1p4c_A_64 - HA => SUBCLASS : 2.1.1

Loops in ArchDB-EC clusters

1p4c_A_8 - HH => SUBCLASS : 2.1.1

Loops not clustered in ArchDB

1p4c_A_69 - AR
1p4c_A_47 - AR
1p4c_A_69 - AR
1p4c_A_75 - EH
1p4c_A_152 - EH
1p4c_A_249 - EH
1p4c_A_304 - EH
1p4c_A_64 - HA
1p4c_A_35 - HE
1p4c_A_308 - HE
1p4c_A_290 - HE
1p4c_A_236 - HE
1p4c_A_214 - HE
1p4c_A_135 - HE
1p4c_A_115 - HE
1p4c_A_90 - HE
1p4c_A_270 - HE
1p4c_A_21 - HH
1p4c_A_166 - HH
1p4c_A_200 - HH

1huv A - percentage of sequence identity: 100
1p5b A - percentage of sequence identity: 100