PDB: 1pgs Compound: Peptide-n(4)-(n-acetyl-beta-d-glucosaminyl) aspara Classification: ENDOGLYCOSIDASE Entry date in PDB: 1995-01-26 Resolution [Å]: 1.80 R-Factor: 0.168

CHAIN: - SWISS-PROT/TREMBL: P21163    KEYWORD: 3D-structure    Hydrolase    Signal    EC: 3.5.1.52 SCOP: b.121.1.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    PHM/PNGase F    Glycosyl-asparaginase    Peptide:N-glycosidase F, PNGase F    Flavobacterium meningosepticum SCOP: b.121.1.1 All beta proteins    Nucleoplasmin-like/VP (viral coat and capsid proteins)    PHM/PNGase F    Glycosyl-asparaginase    Peptide:N-glycosidase F, PNGase F    Flavobacterium meningosepticum GO:

Image Source: PDB

Loops in ArchDB40 clusters

1pgs_*_210 - HA => SUBCLASS : 2.4.1
1pgs_*_62 - HA => SUBCLASS : 4.1.2
1pgs_*_62 - HA => SUBCLASS : 6.1.2
1pgs_*_170 - AR => SUBCLASS : 4.31.1

Loops in ArchDB95 clusters

1pgs_*_170 - AR => SUBCLASS : 4.20.3
1pgs_*_210 - HA => SUBCLASS : 2.1.2
1pgs_*_62 - HA => SUBCLASS : 4.1.2
1pgs_*_62 - HA => SUBCLASS : 6.2.1
1pgs_*_62 - HA => SUBCLASS : 6.2.2

Loops in ArchDB-EC clusters

1pgs_*_62 - HA => SUBCLASS : 6.4.2

Loops not clustered in ArchDB

1pgs_*_6 - AR
1pgs_*_15 - AR
1pgs_*_26 - AR
1pgs_*_40 - AR
1pgs_*_75 - AR
1pgs_*_96 - AR
1pgs_*_109 - AR
1pgs_*_125 - AR
1pgs_*_142 - AR
1pgs_*_159 - AR
1pgs_*_170 - AR
1pgs_*_181 - AR
1pgs_*_202 - AR
1pgs_*_219 - AR
1pgs_*_260 - AR
1pgs_*_272 - AR
1pgs_*_6 - AR
1pgs_*_292 - AR
1pgs_*_15 - AR
1pgs_*_26 - AR
1pgs_*_40 - AR
1pgs_*_75 - AR
1pgs_*_96 - AR
1pgs_*_109 - AR
1pgs_*_125 - AR
1pgs_*_142 - AR
1pgs_*_159 - AR
1pgs_*_272 - AR
1pgs_*_260 - AR
1pgs_*_219 - AR
1pgs_*_292 - AR
1pgs_*_202 - AR
1pgs_*_181 - AR
1pgs_*_193 - HA
1pgs_*_210 - HA
1pgs_*_193 - HA
1pgs_*_62 - HA

1pnf - - percentage of sequence identity: 99
1png - - percentage of sequence identity: 99