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Information on 1q8i
PDB: 1q8i
Compound: DNA polymerase ii
Classification: TRANSFERASE
Entry date in PDB: 2004-01-27
Resolution [Å]: 2.00
R-Factor: 0.199


CHAIN: A
SWISS-PROT/TREMBL: P21189
   KEYWORD: Complete proteome    DNA repair    DNA-binding    DNA-directed DNA polymerase    SOS response    Transferase   
EC: 2.7.7.7
SCOP: c.55.3.5 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Ribonuclease H-like    DnaQ-like 3'-5' exonuclease    Exonuclease domain of family B DNA polymerases    Escherichia coli
SCOP: e.8.1.1 Multi-domain proteins (alpha and beta)    DNA/RNA polymerases    DNA/RNA polymerases    DNA polymerase I    Family B DNA polymerase    Escherichia coli
GO:  3'-5' exonuclease activity    DNA binding    DNA-directed DNA polymerase activity    nucleotide binding    DNA replication   
1q8i Image
Image Source: PDB

Stored Loops of 1q8i

Loops in ArchDB40 clusters

1q8i_A_513 - HE => SUBCLASS : 1.1.1
1q8i_A_201 - HE => SUBCLASS : 3.1.1
1q8i_A_201 - HE => SUBCLASS : 3.1.2
1q8i_A_20 - HA => SUBCLASS : 2.2.2
1q8i_A_617 - HA => SUBCLASS : 2.3.1
1q8i_A_540 - HA => SUBCLASS : 2.9.1
1q8i_A_152 - HA => SUBCLASS : 4.2.1
1q8i_A_152 - HA => SUBCLASS : 4.2.2
1q8i_A_450 - HA => SUBCLASS : 4.5.1
1q8i_A_63 - HA => SUBCLASS : 5.1.5
1q8i_A_41 - EH => SUBCLASS : 1.3.1
1q8i_A_219 - EH => SUBCLASS : 1.4.4
1q8i_A_194 - EH => SUBCLASS : 2.1.1
1q8i_A_77 - EH => SUBCLASS : 2.1.1
1q8i_A_264 - AR => SUBCLASS : 3.1.1
1q8i_A_264 - AR => SUBCLASS : 3.5.2
1q8i_A_264 - AR => SUBCLASS : 4.6.1
1q8i_A_30 - AR => SUBCLASS : 4.26.1
1q8i_A_316 - HH => SUBCLASS : 1.2.3
1q8i_A_325 - HH => SUBCLASS : 1.3.4
1q8i_A_466 - HH => SUBCLASS : 2.2.1
1q8i_A_643 - HH => SUBCLASS : 3.2.11

Loops in ArchDB95 clusters

1q8i_A_41 - EH => SUBCLASS : 1.2.1
1q8i_A_219 - EH => SUBCLASS : 1.4.5
1q8i_A_77 - EH => SUBCLASS : 2.1.1
1q8i_A_194 - EH => SUBCLASS : 2.1.1
1q8i_A_264 - AR => SUBCLASS : 1.1.2
1q8i_A_264 - AR => SUBCLASS : 4.2.3
1q8i_A_316 - HH => SUBCLASS : 1.2.4
1q8i_A_325 - HH => SUBCLASS : 1.3.1
1q8i_A_466 - HH => SUBCLASS : 2.2.1
1q8i_A_643 - HH => SUBCLASS : 3.1.25
1q8i_A_643 - HH => SUBCLASS : 3.4.6
1q8i_A_513 - HE => SUBCLASS : 1.1.1
1q8i_A_201 - HE => SUBCLASS : 3.3.2
1q8i_A_123 - HA => SUBCLASS : 2.1.2
1q8i_A_540 - HA => SUBCLASS : 2.11.1
1q8i_A_152 - HA => SUBCLASS : 3.1.2
1q8i_A_450 - HA => SUBCLASS : 3.2.1
1q8i_A_152 - HA => SUBCLASS : 5.1.2
1q8i_A_63 - HA => SUBCLASS : 5.1.4

Loops not clustered in ArchDB

1q8i_A_134 - AR
1q8i_A_410 - EH
1q8i_A_626 - EH
1q8i_A_548 - EH
1q8i_A_458 - EH
1q8i_A_273 - EH
1q8i_A_3 - HA
1q8i_A_592 - HA
1q8i_A_254 - HA
1q8i_A_175 - HA
1q8i_A_165 - HA
1q8i_A_559 - HE
1q8i_A_435 - HE
1q8i_A_369 - HE
1q8i_A_229 - HE
1q8i_A_110 - HE
1q8i_A_50 - HE
1q8i_A_749 - HH
1q8i_A_663 - HH
1q8i_A_486 - HH
1q8i_A_423 - HH
1q8i_A_348 - HH
1q8i_A_293 - HH
1q8i_A_277 - HH
1q8i_A_86 - HH
1q8i_A_757 - HH

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