PDB: 1qz5 Compound: actin, alpha skeletal muscle Classification: STRUCTURAL PROTEIN Entry date in PDB: 2003-11-11 Resolution [Å]: 1.45 R-Factor: 0.170

CHAIN: A SWISS-PROT/TREMBL: P02568    KEYWORD: 3D-structure    Acetylation    Disease mutation    Methylation    Multigene family    Muscle protein    Structural protein    SCOP: c.55.1.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Actin/HSP70    Actin    Rabbit (Oryctolagus cuniculus) SCOP: c.55.1.1 Alpha and beta proteins (a/b)    Ribonuclease H-like motif    Actin-like ATPase domain    Actin/HSP70    Actin    Rabbit (Oryctolagus cuniculus) GO:  actin filament    motor activity    protein binding    structural constituent of cytoskeleton

Image Source: PDB

Loops in ArchDB40 clusters

1qz5_A_338 - HE => SUBCLASS : 1.2.6
1qz5_A_113 - HE => SUBCLASS : 3.1.1
1qz5_A_137 - HE => SUBCLASS : 3.9.1
1qz5_A_79 - HE => SUBCLASS : 6.1.3
1qz5_A_160 - HA => SUBCLASS : 2.1.1
1qz5_A_150 - HA => SUBCLASS : 2.2.1
1qz5_A_8 - HA => SUBCLASS : 2.2.3
1qz5_A_238 - HA => SUBCLASS : 3.1.1
1qz5_A_16 - HA => SUBCLASS : 7.14.1
1qz5_A_131 - EH => SUBCLASS : 0.1.9
1qz5_A_176 - EH => SUBCLASS : 0.1.52
1qz5_A_53 - EH => SUBCLASS : 1.2.3
1qz5_A_103 - EH => SUBCLASS : 3.4.1
1qz5_A_297 - EH => SUBCLASS : 8.3.1
1qz5_A_169 - AR => SUBCLASS : 4.2.2
1qz5_A_169 - AR => SUBCLASS : 5.2.1
1qz5_A_274 - HH => SUBCLASS : 2.1.32
1qz5_A_182 - HH => SUBCLASS : 6.9.1

Loops in ArchDB95 clusters

1qz5_A_131 - EH => SUBCLASS : 0.1.8
1qz5_A_247 - EH => SUBCLASS : 0.1.68
1qz5_A_53 - EH => SUBCLASS : 1.3.6
1qz5_A_176 - EH => SUBCLASS : 2.2.4
1qz5_A_103 - EH => SUBCLASS : 3.6.1
1qz5_A_297 - EH => SUBCLASS : 8.11.1
1qz5_A_169 - AR => SUBCLASS : 3.2.1
1qz5_A_359 - HH => SUBCLASS : 1.6.1
1qz5_A_274 - HH => SUBCLASS : 2.1.17
1qz5_A_182 - HH => SUBCLASS : 6.14.1
1qz5_A_203 - HH => SUBCLASS : 6.46.1
1qz5_A_290 - HE => SUBCLASS : 1.3.14
1qz5_A_113 - HE => SUBCLASS : 3.1.1
1qz5_A_137 - HE => SUBCLASS : 3.1.4
1qz5_A_79 - HE => SUBCLASS : 6.9.1
1qz5_A_338 - HE => SUBCLASS : 8.6.1
1qz5_A_160 - HA => SUBCLASS : 2.1.1
1qz5_A_150 - HA => SUBCLASS : 2.2.1
1qz5_A_8 - HA => SUBCLASS : 2.2.3
1qz5_A_238 - HA => SUBCLASS : 3.1.1
1qz5_A_16 - HA => SUBCLASS : 7.14.1

Loops not clustered in ArchDB

1qz5_A_29 - AR
1qz5_A_66 - EH
1qz5_A_329 - EH
1qz5_A_357 - EH
1qz5_A_35 - HA
1qz5_A_56 - HE
1qz5_A_223 - HE
1qz5_A_309 - HE
1qz5_A_253 - HH

1atn A - percentage of sequence identity: 100
1c0g A - percentage of sequence identity: 90
1d4x A - percentage of sequence identity: 93
1dej A - percentage of sequence identity: 89
1eqy A - percentage of sequence identity: 100
1esv A - percentage of sequence identity: 100
1h1v A - percentage of sequence identity: 100
1hlu A - percentage of sequence identity: 93
1ijj A - percentage of sequence identity: 100
1ijj B - percentage of sequence identity: 100
1j6z A - percentage of sequence identity: 100
1kxp A - percentage of sequence identity: 100
1lcu A - percentage of sequence identity: 99
1lcu B - percentage of sequence identity: 99
1lot B - percentage of sequence identity: 100
1m8q 0 - percentage of sequence identity: 100
1m8q 1 - percentage of sequence identity: 100
1m8q 2 - percentage of sequence identity: 100
1m8q 3 - percentage of sequence identity: 100
1m8q 4 - percentage of sequence identity: 100
1m8q 5 - percentage of sequence identity: 100
1m8q 7 - percentage of sequence identity: 100
1m8q 8 - percentage of sequence identity: 100
1m8q 9 - percentage of sequence identity: 100
1m8q V - percentage of sequence identity: 100
1m8q W - percentage of sequence identity: 100
1m8q X - percentage of sequence identity: 100
1m8q Y - percentage of sequence identity: 100
1m8q Z - percentage of sequence identity: 100
1ma9 B - percentage of sequence identity: 100
1mdu B - percentage of sequence identity: 100
1mdu E - percentage of sequence identity: 100
1mvw 1 - percentage of sequence identity: 100
1mvw 2 - percentage of sequence identity: 100
1mvw 3 - percentage of sequence identity: 100
1mvw 4 - percentage of sequence identity: 100
1mvw 5 - percentage of sequence identity: 100
1mvw 6 - percentage of sequence identity: 100
1mvw 7 - percentage of sequence identity: 100
1mvw 8 - percentage of sequence identity: 100
1mvw 9 - percentage of sequence identity: 100
1mvw V - percentage of sequence identity: 100
1mvw W - percentage of sequence identity: 100
1mvw X - percentage of sequence identity: 100
1mvw Y - percentage of sequence identity: 100
1mvw Z - percentage of sequence identity: 100
1nlv A - percentage of sequence identity: 91
1nmd A - percentage of sequence identity: 91
1nwk A - percentage of sequence identity: 100
1o18 1 - percentage of sequence identity: 100
1o18 2 - percentage of sequence identity: 100
1o18 3 - percentage of sequence identity: 100
1o18 4 - percentage of sequence identity: 100
1o18 5 - percentage of sequence identity: 100
1o18 6 - percentage of sequence identity: 100
1o18 7 - percentage of sequence identity: 100
1o18 8 - percentage of sequence identity: 100
1o18 9 - percentage of sequence identity: 100
1o18 V - percentage of sequence identity: 100
1o18 W - percentage of sequence identity: 100
1o18 X - percentage of sequence identity: 100
1o18 Y - percentage of sequence identity: 100
1o18 Z - percentage of sequence identity: 100
1o19 1 - percentage of sequence identity: 100
1o19 2 - percentage of sequence identity: 100
1o19 3 - percentage of sequence identity: 100
1o19 4 - percentage of sequence identity: 100
1o19 5 - percentage of sequence identity: 100
1o19 6 - percentage of sequence identity: 100
1o19 7 - percentage of sequence identity: 100
1o19 8 - percentage of sequence identity: 100
1o19 9 - percentage of sequence identity: 100
1o19 V - percentage of sequence identity: 100
1o19 W - percentage of sequence identity: 100
1o19 X - percentage of sequence identity: 100
1o19 Y - percentage of sequence identity: 100
1o19 Z - percentage of sequence identity: 100
1o1a 1 - percentage of sequence identity: 100
1o1a 2 - percentage of sequence identity: 100
1o1a 3 - percentage of sequence identity: 100
1o1a 4 - percentage of sequence identity: 100
1o1a 5 - percentage of sequence identity: 100
1o1a 6 - percentage of sequence identity: 100
1o1a 7 - percentage of sequence identity: 100
1o1a 8 - percentage of sequence identity: 100
1o1a 9 - percentage of sequence identity: 100
1o1a V - percentage of sequence identity: 100
1o1a W - percentage of sequence identity: 100
1o1a X - percentage of sequence identity: 100
1o1a Y - percentage of sequence identity: 100
1o1a Z - percentage of sequence identity: 100
1o1b 0 - percentage of sequence identity: 100
1o1b 1 - percentage of sequence identity: 100
1o1b 2 - percentage of sequence identity: 100
1o1b 3 - percentage of sequence identity: 100
1o1b 4 - percentage of sequence identity: 100
1o1b 5 - percentage of sequence identity: 100
1o1b 7 - percentage of sequence identity: 100
1o1b 8 - percentage of sequence identity: 100
1o1b 9 - percentage of sequence identity: 100
1o1b V - percentage of sequence identity: 100
1o1b W - percentage of sequence identity: 100
1o1b X - percentage of sequence identity: 100
1o1b Y - percentage of sequence identity: 100
1o1b Z - percentage of sequence identity: 100
1o1c 0 - percentage of sequence identity: 100
1o1c 1 - percentage of sequence identity: 100
1o1c 2 - percentage of sequence identity: 100
1o1c 3 - percentage of sequence identity: 100
1o1c 4 - percentage of sequence identity: 100
1o1c 5 - percentage of sequence identity: 100
1o1c 7 - percentage of sequence identity: 100
1o1c 8 - percentage of sequence identity: 100
1o1c 9 - percentage of sequence identity: 100
1o1c V - percentage of sequence identity: 100
1o1c W - percentage of sequence identity: 100
1o1c X - percentage of sequence identity: 100
1o1c Y - percentage of sequence identity: 100
1o1c Z - percentage of sequence identity: 100
1o1d 0 - percentage of sequence identity: 100
1o1d 1 - percentage of sequence identity: 100
1o1d 2 - percentage of sequence identity: 100
1o1d 3 - percentage of sequence identity: 100
1o1d 4 - percentage of sequence identity: 100
1o1d 5 - percentage of sequence identity: 100
1o1d 7 - percentage of sequence identity: 100
1o1d 8 - percentage of sequence identity: 100
1o1d 9 - percentage of sequence identity: 100
1o1d V - percentage of sequence identity: 100
1o1d W - percentage of sequence identity: 100
1o1d X - percentage of sequence identity: 100
1o1d Y - percentage of sequence identity: 100
1o1d Z - percentage of sequence identity: 100
1o1e 1 - percentage of sequence identity: 100
1o1e 2 - percentage of sequence identity: 100
1o1e 3 - percentage of sequence identity: 100
1o1e 4 - percentage of sequence identity: 100
1o1e 5 - percentage of sequence identity: 100
1o1e 6 - percentage of sequence identity: 100
1o1e 7 - percentage of sequence identity: 100
1o1e 8 - percentage of sequence identity: 100
1o1e 9 - percentage of sequence identity: 100
1o1e V - percentage of sequence identity: 100
1o1e W - percentage of sequence identity: 100
1o1e X - percentage of sequence identity: 100
1o1e Y - percentage of sequence identity: 100
1o1e Z - percentage of sequence identity: 100
1o1f 0 - percentage of sequence identity: 100
1o1f 1 - percentage of sequence identity: 100
1o1f 2 - percentage of sequence identity: 100
1o1f 3 - percentage of sequence identity: 100
1o1f 4 - percentage of sequence identity: 100
1o1f 5 - percentage of sequence identity: 100
1o1f 6 - percentage of sequence identity: 100
1o1f 7 - percentage of sequence identity: 100
1o1f 8 - percentage of sequence identity: 100
1o1f V - percentage of sequence identity: 100
1o1f W - percentage of sequence identity: 100
1o1f X - percentage of sequence identity: 100
1o1f Y - percentage of sequence identity: 100
1o1f Z - percentage of sequence identity: 100
1o1g 1 - percentage of sequence identity: 100
1o1g 2 - percentage of sequence identity: 100
1o1g 3 - percentage of sequence identity: 100
1o1g 4 - percentage of sequence identity: 100
1o1g 5 - percentage of sequence identity: 100
1o1g 6 - percentage of sequence identity: 100
1o1g 7 - percentage of sequence identity: 100
1o1g 8 - percentage of sequence identity: 100
1o1g 9 - percentage of sequence identity: 100
1o1g V - percentage of sequence identity: 100
1o1g W - percentage of sequence identity: 100
1o1g X - percentage of sequence identity: 100
1o1g Y - percentage of sequence identity: 100
1o1g Z - percentage of sequence identity: 100
1p8z A - percentage of sequence identity: 100
1qz6 A - percentage of sequence identity: 100
1rdw X - percentage of sequence identity: 100
1rfq A - percentage of sequence identity: 100
1rfq B - percentage of sequence identity: 100
1rgi A - percentage of sequence identity: 100
1s22 A - percentage of sequence identity: 100
1sqk A - percentage of sequence identity: 100
1t44 A - percentage of sequence identity: 100
1wua A - percentage of sequence identity: 100
1y64 A - percentage of sequence identity: 100
1yvn A - percentage of sequence identity: 86
1yxq A - percentage of sequence identity: 100
1yxq B - percentage of sequence identity: 100
2a3z A - percentage of sequence identity: 100
2a40 A - percentage of sequence identity: 100
2a40 D - percentage of sequence identity: 100
2a41 A - percentage of sequence identity: 100
2a42 A - percentage of sequence identity: 100
2a5x A - percentage of sequence identity: 100
2asm A - percentage of sequence identity: 100
2aso A - percentage of sequence identity: 100
2asp A - percentage of sequence identity: 100
2btf A - percentage of sequence identity: 93