PDB: 1r5l Compound: alpha-tocopherol transfer protein Classification: TRANSPORT PROTEIN Entry date in PDB: 2003-11-25 Resolution [Å]: 1.50 R-Factor: 0.187

CHAIN: A SWISS-PROT/TREMBL: P49638    KEYWORD: Disease mutation    Transport    SCOP: a.5.3.1 All alpha proteins    RuvA C-terminal domain-like    CRAL/TRIO N-terminal domain    CRAL/TRIO N-terminal domain    Alpha-tocopherol transfer protein    Human (Homo sapiens) SCOP: c.13.1.1 Alpha and beta proteins (a/b)    SpoIIaa-like    CRAL/TRIO domain    CRAL/TRIO domain    Alpha-tocopherol transfer protein    Human (Homo sapiens) GO:  intracellular    transporter activity    transport

Image Source: PDB

Loops in ArchDB40 clusters

1r5l_A_93 - HE => SUBCLASS : 2.4.1
1r5l_A_129 - HH => SUBCLASS : 1.1.6
1r5l_A_49 - HH => SUBCLASS : 3.8.1

Loops in ArchDB95 clusters

1r5l_A_113 - EH => SUBCLASS : 10.7.1
1r5l_A_129 - HH => SUBCLASS : 1.1.7
1r5l_A_49 - HH => SUBCLASS : 3.7.1
1r5l_A_93 - HE => SUBCLASS : 2.4.2
1r5l_A_101 - HA => SUBCLASS : 10.11.1

Loops not clustered in ArchDB

1r5l_A_154 - EH
1r5l_A_191 - EH
1r5l_A_147 - HE
1r5l_A_173 - HE
1r5l_A_230 - HH
1r5l_A_216 - HH
1r5l_A_204 - HH
1r5l_A_165 - HH
1r5l_A_81 - HH
1r5l_A_63 - HH
1r5l_A_28 - HH
1r5l_A_254 - HH

1oip A - percentage of sequence identity: 100
1oiz B - percentage of sequence identity: 100