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Information on 1rmd
PDB: 1rmd
Compound: rag1
Classification: DNA-BINDING PROTEIN
Entry date in PDB: 1997-07-23
Resolution [Å]: 2.10
R-Factor: 0.209


CHAIN: -
SWISS-PROT/TREMBL: P15919
   KEYWORD: 3D-structure    DNA recombination    DNA-binding    Endonuclease    Hydrolase    Metal-binding    Nuclear protein    Zinc-finger   
SCOP: g.37.1.1 Small proteins    C2H2 and C2HC zinc fingers    C2H2 and C2HC zinc fingers    Classic zinc finger, C2H2    V(D)J recombination activating protein 1 (RAG1), dimerization domain    Mouse (Mus musculus)
SCOP: g.44.1.1 Small proteins    RING/U-box    RING/U-box    RING finger domain, C3HC4    V(D)J recombination activating protein 1 (RAG1), dimerization domain    Mouse (Mus musculus)
GO:  nucleus    ubiquitin ligase complex    nucleic acid binding    ubiquitin-protein ligase activity    zinc ion binding    protein ubiquitination   
1rmd Image
Image Source: PDB

Stored Loops of 1rmd

Loops in ArchDB40 clusters

1rmd_*_36 - HA => SUBCLASS : 3.1.1
1rmd_*_88 - HA => SUBCLASS : 8.9.1

Loops in ArchDB95 clusters

1rmd_*_78 - HE => SUBCLASS : 1.3.3
1rmd_*_36 - HA => SUBCLASS : 3.1.1
1rmd_*_88 - HA => SUBCLASS : 8.20.1

Loops not clustered in ArchDB

1rmd_*_44 - EH
1rmd_*_99 - EH
1rmd_*_18 - HE
1rmd_*_47 - HH

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