PDB: 1yal Compound: chymopapain Classification: HYDROLASE Entry date in PDB: 1996-12-23 Resolution [Å]: 1.70 R-Factor: 0.192

CHAIN: - SWISS-PROT/TREMBL: P14080    KEYWORD: 3D-structure    Hydrolase    Signal    Thiol protease    Zymogen    EC: 3.4.22.6 SCOP: d.3.1.1 Alpha and beta proteins (a+b)    Cysteine proteinases    Cysteine proteinases    Papain-like    Chymopapain    Papaya (Carica papaya) GO:  cysteine-type endopeptidase activity    cysteine-type peptidase activity    proteolysis and peptidolysis

Image Source: PDB

Loops in ArchDB95 clusters

1yal_*_130 - EH => SUBCLASS : 4.1.4
1yal_*_148 - AR => SUBCLASS : 9.5.1
1yal_*_27 - HH => SUBCLASS : 7.1.1
1yal_*_50 - HH => SUBCLASS : 11.3.1
1yal_*_119 - HE => SUBCLASS : 2.6.2
1yal_*_139 - HE => SUBCLASS : 4.32.1
1yal_*_159 - HA => SUBCLASS : 2.1.3
1yal_*_172 - HA => SUBCLASS : 11.1.1

Loops in ArchDB-EC clusters

1yal_*_50 - HH => SUBCLASS : 11.3.1

Loops not clustered in ArchDB

1yal_*_190 - AR
1yal_*_148 - AR
1yal_*_190 - AR
1yal_*_5 - EH
1yal_*_109 - EH
1yal_*_159 - HA
1yal_*_172 - HA
1yal_*_68 - HE

1meg - - percentage of sequence identity: 66
1pci A - percentage of sequence identity: 66
1pci B - percentage of sequence identity: 66
1pci C - percentage of sequence identity: 66