PDB: 4tsv Compound: tumor necrosis factor-alpha Classification: LYMPHOKINE Entry date in PDB: 1998-12-30 Resolution [Å]: 1.80 R-Factor: 0.200

CHAIN: A SWISS-PROT/TREMBL: P01375    KEYWORD: 3D-structure    Cytokine    Lipoprotein    Myristate    Phosphorylation    Polymorphism    Signal-anchor    Transmembrane    SCOP: b.22.1.1 All beta proteins    TNF-like    TNF-like    TNF-like    Tumor necrosis factor (TNF)    Human (Homo sapiens) GO:  membrane    tumor necrosis factor receptor binding    immune response

Image Source: PDB

Loops in ArchDB95 clusters

4tsv_A_113 - AR => SUBCLASS : 3.5.6
4tsv_A_42 - HA => SUBCLASS : 2.1.1
4tsv_A_13 - HA => SUBCLASS : 7.1.1

Loops not clustered in ArchDB

4tsv_A_28 - AR
4tsv_A_36 - AR
4tsv_A_47 - AR
4tsv_A_54 - AR
4tsv_A_90 - AR
4tsv_A_131 - AR
4tsv_A_76 - HA

1a8m A - percentage of sequence identity: 97
1a8m B - percentage of sequence identity: 97
1a8m C - percentage of sequence identity: 97
1tnf A - percentage of sequence identity: 98
1tnf B - percentage of sequence identity: 98
1tnf C - percentage of sequence identity: 98
2az5 A - percentage of sequence identity: 97
2az5 B - percentage of sequence identity: 97
2az5 C - percentage of sequence identity: 97
2az5 D - percentage of sequence identity: 97
2tnf A - percentage of sequence identity: 79
2tnf B - percentage of sequence identity: 79
2tnf C - percentage of sequence identity: 79
2tun A - percentage of sequence identity: 96
2tun B - percentage of sequence identity: 96
2tun C - percentage of sequence identity: 96
2tun D - percentage of sequence identity: 96
2tun E - percentage of sequence identity: 96
2tun F - percentage of sequence identity: 96
5tsw A - percentage of sequence identity: 100
5tsw B - percentage of sequence identity: 100
5tsw C - percentage of sequence identity: 100
5tsw D - percentage of sequence identity: 100
5tsw E - percentage of sequence identity: 100
5tsw F - percentage of sequence identity: 100