ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 16.6.1

Subclass Accession number: 7707
Subclass: 16.6.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 76.0 +/- -35.9
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 7

delta (°): 45-90

theta (°): 45-90

rho (°): 90-135

Consensus Sequence:	LGLAFSphNTVpPpXQpTFF
(φψ)-conformation:	bpappaaapapbwbpbppaa

Pattern:	[G]	[L]	[L]	[G]	[L]	[A]	[F]	[S]	[ST]	[IL]	[N]	[T]	[V]	[QS]	[P]	[KQT]	[AQS]	[Q]	[KT]	[T]	[F]	[F]	[D]	[NT]	[AV]
Conservation:	1.062	-0.135	-0.135	1.062	-0.135	-0.135	1.062	-0.135	-0.894	-0.733	1.062	0.464	-0.135	-1.169	1.661	-1.665	-1.665	0.464	-1.330	0.464	1.062	1.062	1.062	-0.893	-1.331

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bxo_A_120	1bxo	A	120	144	GLLGLAFSSINTVQPQSQTTFFDTV	EEEE-S-GGG---BSS----HHHHH	ebbxaxxaaaxaxbwbxbxxaaaaa
1ibq_A_119	1ibq	A	119	143	GLLGLAFSSINTVQPKAQTTFFDTV	EEEE-S-GGG---BSS----HHHHH	ebbxaxxaaapaxbwbpbxxaaaaa
1oew_A_123	1oew	A	123	147	GLLGLAFSTLNTVSPTQQKTFFDNA	EEEE-S-GGG---BSS----HHHHH	ebbxaxxaaaxaxbwbxbxxaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bxo_A_120	1bxo	A	PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE	L - 121
1bxo_A_120	1bxo	A	PP7METHYL CYCLO[(2S)-2-[[(1R)-1-(N-(L-N-(3-METHYLBUTANOYL)VALYL-L-ASPARTYL)AMINO)-3-METHYLBUTYL] HYDROXYPHOSPHINYLOXY]-3-(3-AMINOMETHYL)PHENYLPROPANOATE	I - 129
1oew_A_123	1oew	A	THRTHREONINE	L - 132
1oew_A_123	1oew	A	THRTHREONINE	T - 134

PDB Site Annotated loops in this subclass

Clusters included in this Subclass