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Information on SUBCLASS 5.12.1
Subclass Accession number: 7950
Subclass: 5.12.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 12.9 +/- 21.6
Average RMSD (Å) : 0.833 +/- 0.082

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: XXXppXXhh
(φψ)-conformation: bbpaabpbb
Pattern: [AGIKL]xx[iklm][aeq]x[HKNTY][DKTY]x[DNP][av][AFLY][agsv][AFLV]
Conservation:-1.243-0.496-1.232-0.1130.420-0.6600.077-0.131-0.7012.7120.5550.789-0.3530.377
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_B_18371a9x   B18371850LQGIHRTDKPAFSFEEEEEESSSSEEEExabbbxaabxbbbb
1k2y_X_4161k2y   X418431GLVRASNTTPVLVLEEEEE-SSSSEEEEbbbbxxaabxbxbb
1l9x_A_2021l9x   A204217ISTMEGYKYPVYGVEEEEEESSS-EEEExabbbxaaxxbbbb
1qks_A_3001qks   A301314AAILASHYRPEFIVEEEEE-SSSSEEEEFxbbbxaabxbbbb
1scj_B_3361scj   B336349KVEKQFKYVNAAAAEEEEE-SSSSEEEEbxabbxaabxbbxb
1spb_P_361spb   P3649KVQKQFKYVDAASAEEEEE-SSSSEEEEbpabxxaaxxbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_B_18371a9x   B     CYG2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC ACID S - 1849
1a9x_B_18371a9x   B     CYG2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC ACID F - 1850
1qks_A_3001qks   A     DHEHEME D V - 300
1qks_A_3001qks   A     DHEHEME D A - 301
1qks_A_3001qks   A     DHEHEME D A - 302
1qks_A_3001qks   A     DHEHEME D I - 303
1qks_A_3001qks   A     DHEHEME D L - 304

Clusters included in this Subclass
CLUSTER: HA.5.47