Information on SUBCLASS 7.2.1 |
Subclass Accession number: 7993
Subclass: 7.2.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 14.6 +/- 16.6 Average RMSD (Å) : 0.613 +/- 0.300 Consensus geometry
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Consensus Sequence: | hphXGXpphXX |
(φψ)-conformation: | bbppgpabpbb |
Pattern: | x | [AFGLVY] | [kpqrt] | [AGLMPV] | [EHKPR] | [GY] | x | [DEKNST] | [DEKQT] | [apvwy] | x | x |
Conservation: | -0.678 | -0.417 | -0.139 | -0.455 | 0.315 | 2.624 | -0.509 | 0.406 | 0.966 | -0.843 | -0.260 | -1.012 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f9z_A_95 | 1f9z | A | 100 | 111 | AGPVKGGTTVIA | EEE-TTS--EEE | pepxpvbaxxbb |
1ghp_A_244 | 1ghp | A | 249 | 260 | FVYPKGQSEPIV | EEE-TT--S-EE | bbbxpgxaxxbx |
1h0h_A_74 | 1h0h | A | 74 | 85 | LYRAPGSDQWEE | EEE-TT-SS-EE | bbbxpvxabxbx |
1hyo_A_298 | 1hyo | A | 302 | 313 | SLKGEGMSQAAT | EEE-TT-SS-EE | bbbxpgxabxxx |
1i50_B_269 | 1i50 | B | 270 | 281 | KATLPYIKQDIP | EEE-TT-SS-EE | bbbxxvbabxbp |
1kqf_A_112 | 1kqf | A | 112 | 123 | EYRAPGSDKWQR | EEE-TT-SS-EE | bbbxpvxabxbx |
1lml_*_521 | 1lml | - | 523 | 534 | SVQVHGSNDYTN | EEE-TT-SS-EE | bbbxxvbabxbp |
1m7v_A_168 | 1m7v | A | 169 | 180 | IFRMRGDEQPVW | EEEETT-SS-EE | bbbxxgxabxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f9z_A_95 | 1f9z | A | NINICKEL (II) ION | F - 112 |
1ghp_A_244 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | R - 244 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1lml_*_521 | 1lml | * | CA3CARBOHYDRATE BINDING SITE. | N - 534 |
Clusters included in this Subclass |
CLUSTER: HA.6.23 |