Information on SUBCLASS 1.2.9 |
Subclass Accession number: 8145
Subclass: 1.2.9 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 13 Average sequence ID (%) : 13.1 +/- 15.9 Average RMSD (Å) : 0.562 +/- 0.206 Consensus geometry
|
Consensus Sequence: | pXcXX |
(φψ)-conformation: | aalbb |
Pattern: | [adekqr] | [adgknqrt] | x | x | [DEKQRS] | x | [gnr] | x | x |
Conservation: | -0.058 | -0.735 | -0.208 | -0.814 | 1.114 | -0.514 | 2.119 | -0.869 | -0.035 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cz3_A_25 | 1cz3 | A | 33 | 41 | KITTEIGNV | HHHHHHTEE | aaaaaavbb |
1d3y_A_323 | 1d3y | A | 330 | 338 | KQMLDMGVR | HHHHHHTEE | aaaaaavbb |
1e4i_A_430 | 1e4i | A | 436 | 444 | RNVVSNNWL | HHHHHHTEE | aaaaaavbb |
1eu1_A_559 | 1eu1 | A | 560 | 568 | EDFWSEGIV | HHHHHH-EE | aaaaaavbb |
1evl_A_598 | 1evl | A | 598 | 606 | DKEVESGKV | HHHHHHTEE | aaaaaavbb |
1g8p_A_158 | 1g8p | A | 165 | 173 | LDVAQSGEN | HHHHHHSEE | aaaaaavbb |
1gai_*_318 | 1gai | - | 333 | 341 | YQWDKQGSL | HHHHHHTEE | aaaaaavbb |
1h4v_B_386 | 1h4v | B | 386 | 394 | EDELRAGEV | HHHHHHTEE | aaaaaavbb |
1pb1_A_86 | 1pb1 | A | 90 | 98 | DLIREYRVA | HHHHHHSEE | aaaaaagbb |
1pjr_*_169 | 1pjr | - | 182 | 190 | QRLLRNHSL | HHHHHTTEE | aaaaaalbb |
1qox_A_434 | 1qox | A | 440 | 448 | KGVISRGWL | HHHHHHSEE | aaaaaavbb |
1sur_*_136 | 1sur | - | 141 | 149 | RALKELNAQ | HHHHHTTEE | aaaaaalxa |
1tmo_*_567 | 1tmo | - | 568 | 576 | ATFWKQGYV | HHHHHH-EE | aaaaaavbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eu1_A_559 | 1eu1 | A | GLCGLUCOSE | E - 565 |
1eu1_A_559 | 1eu1 | A | GLCGLUCOSE | G - 566 |
1eu1_A_559 | 1eu1 | A | GLCGLUCOSE | I - 567 |
1eu1_A_559 | 1eu1 | A | GLCGLUCOSE | E - 569 |
1gai_*_318 | 1gai | * | GACDIHYDRO-ACARBOSE | L - 319 |
1pb1_A_86 | 1pb1 | A | GOLGLYCEROL | R - 96 |
Clusters included in this Subclass |
CLUSTER: HE.1.21 |
CLUSTER: HE.2.32 |