Information on SUBCLASS 2.2.13 |
Subclass Accession number: 8212
Subclass: 2.2.13 ![]() Type: HE alpha-beta DB: ArchDB-EC Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 8 Average sequence ID (%) : 8.9 +/- 11.4 Average RMSD (Å) : 0.787 +/- 0.210 Consensus geometry
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Consensus Sequence: | pphpXh |
(φψ)-conformation: | aapabb |
Pattern: | x | x | [aily] | x | [egkst] | [kst] | [afgilv] | [deknpq] | x | [GILVY] | x | [FIKV] |
Conservation: | -0.740 | -0.915 | 0.670 | -0.740 | 0.154 | 1.427 | -0.286 | 0.388 | -1.152 | 1.027 | -1.319 | 1.485 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1eua_A_8 | 1eua | A | 9 | 20 | ESILTTGPVVPV | HHHHHS-SEEEE | aaaaaababbxx |
1f8y_A_124 | 1f8y | A | 124 | 135 | LMSWGVSDNVIK | HHHHHH-SEEEE | aaaaaaxabbbx |
1jjf_A_213 | 1jjf | A | 213 | 224 | KAAREKLKLLFI | HHHHHH-SEEEE | aaaaaaxabbbb |
1l9x_A_56 | 1l9x | A | 60 | 71 | EILFKSINGILF | HHHHHHSSEEEE | aaaaaaxabbbb |
1moq_*_285 | 1moq | - | 286 | 297 | DELLSKVEHIQI | HHHHHH--EEEE | aaaaaaxabbbb |
1nyr_A_31 | 1nyr | A | 31 | 42 | PGLRKKAVAGKF | HHHHHH--EEEE | aaaaaapabbbb |
1pjr_*_207 | 1pjr | - | 211 | 222 | HYYQYKFQYIHI | HHHHHH-SEEEE | aaaaaaxabxbb |
3pmg_A_140 | 3pmg | A | 147 | 158 | FQISKTIEEYAI | HHHHHH--EEEE | aaaaaapabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1eua_A_8 | 1eua | A | PYRPYRUVIC ACID | V - 20 |
1f8y_A_124 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | L - 124 |
1f8y_A_124 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | M - 125 |
Clusters included in this Subclass |
CLUSTER: HE.2.52 |