Information on SUBCLASS 2.3.4 |
Subclass Accession number: 8228
Subclass: 2.3.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 15 Average sequence ID (%) : 17.2 +/- 18.1 Average RMSD (Å) : 0.647 +/- 0.223 Consensus geometry
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Consensus Sequence: | pXGXhp |
(φψ)-conformation: | aalabb |
Pattern: | x | x | x | [ACFGLMW] | x | [ADEKNQS] | x | [DEGS] | x | [afilvy] | [dhkrt] | x |
Conservation: | -0.014 | -0.351 | -0.672 | -0.262 | -0.885 | 0.751 | -0.564 | 2.792 | 0.040 | 0.366 | -0.465 | -0.736 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b1y_A_148 | 1b1y | A | 163 | 174 | MKDFLDAGVIVD | HHHHHHHT-EEE | aaaaaaavaxab |
1ei9_A_271 | 1ei9 | A | 271 | 282 | LKAMDKAGQLVF | HHHHHHTT-EEE | aaaaaaavabbb |
1evl_A_244 | 1evl | A | 245 | 255 | RKIGKQLDLYH. | HHHHHHTT-EE. | aaaaaaalabb. |
1f20_A_1293 | 1f20 | A | 1296 | 1307 | TLQAKNKGVFRE | HHHHHHTTSEEE | aaaaaaavabab |
1fp1_D_81 | 1fp1 | D | 89 | 100 | LRLLASYSVLTS | HHHHHHTTSEEE | aaaaaaavabbb |
1frb_*_137 | 1frb | - | 144 | 155 | MEELVDQGLVKA | HHHHHHTTSEEE | aaaaaaavabab |
1gve_A_117 | 1gve | A | 124 | 135 | CHQLHQEGKFVE | HHHHHHTTSEEE | aaaaaaavabab |
1hw6_A_117 | 1hw6 | A | 124 | 135 | MIELRAAGLTRS | HHHHHHTTSEEE | aaaaaaavabab |
1j96_A_144 | 1j96 | A | 151 | 162 | MEKCKDAGLAKS | HHHHHHTTSEEE | aaaaaaavabab |
1mx3_A_272 | 1mx3 | A | 275 | 286 | LAQALKEGRIRG | HHHHHHHTSEEE | aaaaaaavabab |
1mzr_A_117 | 1mzr | A | 124 | 135 | MIELQKEGLIKS | HHHHHHTTSEEE | aaaaaaavabab |
1nyr_A_243 | 1nyr | A | 244 | 255 | RKIGKELELFTN | HHHHHHTT-EEE | aaaaaaalabbb |
1olt_A_401 | 1olt | A | 407 | 418 | LAPLAKDGLVDV | HHHHHHTTSEEE | aaaaaaavabxb |
1poi_A_85 | 1poi | A | 87 | 98 | FRKWFEAGKLTM | HHHHHHHT-SEE | aaaaaaavabxb |
1qop_B_311 | 1qop | B | 313 | 324 | HAYLNSIGRADY | HHHHHHTTSSEE | aaaaaaavabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f20_A_1293 | 1f20 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | A - 1311 |
1f20_A_1293 | 1f20 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Y - 1312 |
1frb_*_137 | 1frb | * | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 159 |
1gve_A_117 | 1gve | A | GOLGLYCEROL | I - 117 |
1gve_A_117 | 1gve | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 139 |
1j96_A_144 | 1j96 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 166 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gve_A_117 | 1gve | A | AC1NAP BINDING SITE FOR CHAIN A | S - 139 |
Clusters included in this Subclass |
CLUSTER: HE.3.39 |