Information on SUBCLASS 6.28.1 |
Subclass Accession number: 8672
Subclass: 6.28.1 ![]() Type: HE alpha-beta DB: ArchDB-EC Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 4 Average sequence ID (%) : 9.5 +/- 10.6 Average RMSD (Å) : 1.450 +/- 0.520 Consensus geometry
|
Consensus Sequence: | pXXXcppXpX |
(φψ)-conformation: | aapaapapbb |
Pattern: | x | x | x | x | x | [DEP] | [CDN] | x | [HNS] | [ATV] | x | x | x | [ILT] |
Conservation: | -1.078 | -1.146 | -0.764 | -0.764 | -0.764 | 1.406 | 0.633 | -0.611 | 2.066 | 0.873 | -0.060 | -0.093 | -0.534 | 0.834 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i7p_A_183 | 1i7p | A | 192 | 205 | AVLKDPNDHTVCYL | HHHH-TT---EEEE | aaaaxaaxaxbbbb |
1jqk_A_343 | 1jqk | A | 343 | 356 | LPRIAECFHTQIIT | HHHHHHTSS-EEEE | aaaaaaabapbbbx |
1meo_A_14 | 1meo | A | 19 | 32 | DSTREPNSSAQIDI | HHHHSTT-S-EEEE | aaaaxaaxabbxab |
1pja_A_112 | 1pja | A | 120 | 133 | LLSVMDDHNVDSFI | HHHH-TT--EEEEE | aaaabaaxaxaxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i7p_A_183 | 1i7p | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 184 |
1i7p_A_183 | 1i7p | A | FADFLAVIN-ADENINE DINUCLEOTIDE | P - 185 |
1i7p_A_183 | 1i7p | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Q - 210 |
1meo_A_14 | 1meo | A | PO4PHOSPHATE ION | L - 14 |
1meo_A_14 | 1meo | A | PO4PHOSPHATE ION | Q - 15 |
1meo_A_14 | 1meo | A | PO4PHOSPHATE ION | A - 16 |
1meo_A_14 | 1meo | A | PO4PHOSPHATE ION | L - 17 |
1pja_A_112 | 1pja | A | GOLGLYCEROL | Q - 112 |
Clusters included in this Subclass |
CLUSTER: HE.5.220 |