Information on SUBCLASS 4.12.3 |
Subclass Accession number: 1827
Subclass: 4.12.3 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.2 (>75 %) 1.2.4 (>75 %) GO : GO:0003676 (>50 %) GO:0004518 (>50 %) GO:0004519 (>50 %) GO:0004540 (>50 %) GO:0016624 (>75 %) GO:0016788 (>50 %) GO:0016903 (>75 %) SCOP : 52921 (>75 %) 52922 (>75 %) 52926 (>75 %) 54075 (>50 %) 54076 (>50 %) 54077 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 10.3 +/- 14.8 Average RMSD (Å) : 1.033 +/- 0.404 Consensus geometry
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Consensus Sequence: | XXXXppXX |
(φψ)-conformation: | bbpappbb |
Pattern: | [CNR] | [TVY] | x | [PST] | x | [RS] | [EKT] | [FHM] | x | [AIL] | x | [DV] | [AC] |
Conservation: | -0.667 | -0.419 | -0.060 | 0.075 | -0.667 | 0.384 | -0.048 | -0.048 | -1.038 | -0.172 | -0.543 | 0.144 | 3.058 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b93_A_3 | 1b93 | A | 6 | 18 | RTLPARKHIALVA | EEE-SS-EEEEEE | bbxxaxxxbxbbb |
1dy5_A_72 | 1dy5 | A | 72 | 84 | CYQSYSTMSITDC | EEE-SS-EEEEEE | bbbxaxxbxbbxb |
1onc_*_55 | 1onc | - | 56 | 68 | NVLTTSEFYLSDC | EEE-SS-EEEEEE | xbxpaxxbxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b93_A_3 | 1b93 | A | FMTFORMIC ACID | L - 16 |
1b93_A_3 | 1b93 | A | FMTFORMIC ACID | V - 17 |
1b93_A_3 | 1b93 | A | FMTFORMIC ACID | A - 18 |
1dy5_A_72 | 1dy5 | A | IASASPARTYL GROUP | C - 72 |
1dy5_A_72 | 1dy5 | A | IPAISOPROPYL ALCOHOL | C - 72 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | D - 83 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | C - 84 |
1dy5_A_72 | 1dy5 | A | ACTACETATE ION | R - 85 |
Clusters included in this Subclass |
CLUSTER: AR.5.200 |