Information on SUBCLASS 1.2.21 |
Subclass Accession number: 2099
Subclass: 1.2.21 ![]() Type: HH alpha-alpha DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 3.5 (>50 %) 3.5.1 (>50 %) 3.5.1.38 GO : GO:0004067 (>50 %) GO:0016810 (>50 %) GO:0016811 (>50 %) GO:0030554 (>75 %) GO:0050417 (>50 %) SCOP : 53773 (>50 %) 53774 (>50 %) 53775 (>50 %) |
Number of loops: 5 Average sequence ID (%) : 25.4 +/- 19.5 Average RMSD (Å) : 0.400 +/- 0.122 Consensus geometry
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Consensus Sequence: | XpDPp |
(φψ)-conformation: | aabaa |
Pattern: | [ENS] | [deks] | [LV] | [kmr] | [EQRS] | [DN] | [P] | [ERS] | [FIKL] | [AFIL] | [AKNT] | [ERST] | [FILM] |
Conservation: | -0.079 | -0.755 | 0.516 | -0.518 | -0.267 | 1.187 | 2.773 | -0.289 | -0.728 | -0.688 | -0.607 | -0.512 | -0.032 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a53_*_234 | 1a53 | - | 234 | 246 | SSLMRNPEKIKEF | HHHHH-TTHHHHH | aaaaabaaaaaaa |
1ddz_A_113 | 1ddz | A | 124 | 136 | EMLKQDPEFFNRL | HHHHH-TTHHHHH | aaaaabaaaaaaa |
1gwu_A_14 | 1gwu | A | 24 | 36 | NELRSDPRIAASI | HHHHH-TTHHHHH | aaaaabaaaaaaa |
1jkv_A_88 | 1jkv | A | 89 | 101 | EDLKRDPSLATTM | HHHHH-TTHHHHH | aaaaabaaaaaaa |
1qo2_A_103 | 1qo2 | A | 103 | 115 | SKVLEDPSFLKSL | HHHHH-TTHHHHH | aaaaabaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gwu_A_14 | 1gwu | A | HEMHEM BINDING SITE FOR CHAIN A | R - 31 |
1gwu_A_14 | 1gwu | A | HEMHEM BINDING SITE FOR CHAIN A | A - 34 |
1gwu_A_14 | 1gwu | A | HEMHEM BINDING SITE FOR CHAIN A | S - 35 |
1gwu_A_14 | 1gwu | A | HEMHEM BINDING SITE FOR CHAIN A | R - 38 |
1gwu_A_14 | 1gwu | A | HEMHEM BINDING SITE FOR CHAIN A | F - 41 |
1gwu_A_14 | 1gwu | A | AC1ACT BINDING SITE FOR CHAIN A | H - 42 |
1gwu_A_14 | 1gwu | A | CA1CA BINDING SITE FOR CHAIN A | D - 43 |
Clusters included in this Subclass |
CLUSTER: HH.2.82 |