Information on SUBCLASS 4.10.1 |
Subclass Accession number: 2393
Subclass: 4.10.1 ![]() Type: HH alpha-alpha DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation SCOP : 48556 (>75 %) 48557 (>75 %) 48558 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 11.1 +/- 12.7 Average RMSD (Å) : 1.200 +/- 0.163 Consensus geometry
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Consensus Sequence: | XpXXXXXX |
(φψ)-conformation: | aabpbpaa |
Pattern: | x | [EQS] | [HLY] | x | x | [DRT] | x | [EHW] | x | [CDPT] | x | x | x | [IL] | [AKRS] | [KQ] | x | x |
Conservation: | -0.910 | 0.927 | 0.181 | -0.273 | -0.910 | -0.058 | -0.485 | 0.424 | -0.061 | -0.698 | -0.161 | -1.335 | -0.344 | 2.450 | 0.081 | 2.207 | -0.769 | -0.265 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1i6l_A_41 | 1i6l | A | 41 | 58 | DQHAITVWQDPHELRQNI | HHHHTTS---HHHHHHHH | aaaaaabpbxaaaaaaaa |
1kxp_D_340 | 1kxp | D | 348 | 365 | FELSRRTHLPEVFLSKVL | HHHHTT--S-HHHHHHHH | aaaaaabxbxaaaaaaaa |
1n81_A_91 | 1n81 | A | 106 | 123 | ISYCTDKEVTEDYIKKID | HHHHSSS---HHHHHHHH | aaaaaIpxxxaaaaaaaa |
1smt_A_46 | 1smt | A | 52 | 69 | LSLLARSELCVGDLAQAI | HHHHTT--B-HHHHHHHH | aaaaaabxbxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6l_A_41 | 1i6l | A | MSESELENOMETHIONINE | H - 43 |
1i6l_A_41 | 1i6l | A | TYMTRYPTOPHANYL-5'AMP | H - 43 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | P - 51 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | H - 52 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | R - 55 |
1i6l_A_41 | 1i6l | A | MSESELENOMETHIONINE | Q - 56 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | Q - 56 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | N - 57 |
1i6l_A_41 | 1i6l | A | MSESELENOMETHIONINE | R - 59 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | R - 59 |
1i6l_A_41 | 1i6l | A | MSESELENOMETHIONINE | R - 60 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | R - 60 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | L - 61 |
1i6l_A_41 | 1i6l | A | MSESELENOMETHIONINE | A - 63 |
1i6l_A_41 | 1i6l | A | GOLGLYCEROL | L - 64 |
Clusters included in this Subclass |
CLUSTER: HH.6.29 |