Information on SUBCLASS 4.25.1 |
Subclass Accession number: 2415
Subclass: 4.25.1 ![]() Type: HH alpha-alpha DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 2.4 (>75 %) 2.4.1 (>75 %) 2.4.1.13.2 (>75 %) 3.2.2 (>75 %) 3.2.2.23 GO : GO:0003906 (>75 %) GO:0004518 (>75 %) GO:0004519 (>75 %) GO:0004536 (>75 %) GO:0008270 (>75 %) GO:0008534 (>75 %) GO:0016301 (>75 %) GO:0016788 (>75 %) GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0016829 (>75 %) GO:0016835 (>75 %) GO:0019104 (>75 %) GO:0046914 (>75 %) SCOP : 46946 (>75 %) 47953 (>75 %) 47954 (>75 %) 47955 (>75 %) 52539 (>75 %) 52540 (>75 %) 53755 (>75 %) 53756 (>75 %) 53766 (>75 %) 81297 (>75 %) 81626 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 8.3 +/- 10.9 Average RMSD (Å) : 1.100 +/- 0.082 Consensus geometry
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Consensus Sequence: | pppXhcXh |
(φψ)-conformation: | pabpppaa |
Pattern: | [AEL] | [EGS] | [EKY] | [FLV] | [EGRS] | [AEKT] | x | x | [FPT] | [ILPV] | [DEK] | x | [APTV] | [AEQT] | [FKL] | x |
Conservation: | -0.652 | 0.748 | 0.802 | 1.308 | -0.656 | -0.323 | 0.325 | -0.768 | -0.271 | -0.101 | 2.623 | -1.434 | -0.434 | -0.101 | 0.036 | -1.101 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ash_*_105 | 1ash | - | 116 | 131 | EEYLGKKTTLDEPTKQ | HHHHHHHS---HHHHH | aaaaaaabxxxaaaaa |
1f5q_B_91 | 1f5q | B | 102 | 117 | AGKVRAYMPIKATQLA | HHHHH-SS---HHHHH | aaaaaxaxpxxaaaaa |
1k7j_A_72 | 1k7j | A | 72 | 87 | LSELSTYSFVDNVAFR | HHHHHHHB---HHHHH | aaaaaaabxbxaaaaa |
1vin_*_253 | 1vin | - | 264 | 279 | ASKFEEIYPPEVAEFV | HHHHH-SS---HHHHH | aaaaaxabxxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ash_*_105 | 1ash | * | HEMPROTOPORPHYRIN IX CONTAINING FE | V - 107 |
1ash_*_105 | 1ash | * | HEMPROTOPORPHYRIN IX CONTAINING FE | W - 108 |
1ash_*_105 | 1ash | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 111 |
1ash_*_105 | 1ash | * | HEMPROTOPORPHYRIN IX CONTAINING FE | W - 112 |
1ash_*_105 | 1ash | * | HEMPROTOPORPHYRIN IX CONTAINING FE | F - 140 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | L - 72 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | E - 74 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | L - 75 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | S - 76 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | Y - 78 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | S - 79 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | V - 81 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | V - 84 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | A - 85 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | F - 86 |
1k7j_A_72 | 1k7j | A | MSESELENOMETHIONINE | R - 87 |
Clusters included in this Subclass |
CLUSTER: HH.5.131 |