Information on SUBCLASS 6.19.1 |
Subclass Accession number: 2505
Subclass: 6.19.1 Type: HH alpha-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 9.0 +/- 9.4 Average RMSD (Å) : 1.267 +/- 0.252 Consensus geometry
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Consensus Sequence: | cXcXpXhppp |
(φψ)-conformation: | aalpabbpaa |
Pattern: | [IKL] | [AN] | x | [CIL] | [DGQ] | [KNR] | x | [AI] | x | [KN] | x | [GK] | [ADK] | [DEN] | x | [ILV] | [ST] | [DES] | [DE] | [AEL] | [EFR] | [ILV] | [ALT] | [ALV] | [AL] | x |
Conservation: | -0.738 | 0.013 | -1.171 | 0.346 | -0.304 | 0.672 | -0.954 | 0.228 | -1.063 | 1.314 | -0.954 | 0.734 | -0.738 | 0.997 | -1.171 | 1.105 | 1.204 | 0.563 | 2.504 | -1.171 | -1.063 | 1.105 | -0.521 | -0.196 | 0.213 | -0.954 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b67_A_6 | 1b67 | A | 6 | 31 | IAPIGRIIKNAGAERVSDDARIALAK | HHHHHHHHHHTT-S---HHHHHHHHH | aaaaaaaaaaagxabbxaaaaaaaaa |
1khy_A_85 | 1khy | A | 91 | 116 | LNLCDKLAQKRGDNFISSELFVLAAL | HHHHHHHHHHHT-SSB-HHHHHHHHH | aaaaaaaaaaavxabxxaaaaaaaaa |
1ng6_A_20 | 1ng6 | A | 30 | 55 | KASLQNEAIKLKKDSLTEDEELTVLS | HHHHHHHHHHTTSS---HHHHHHHHH | aaaaaaaaaaalbabbxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1khy_A_85 | 1khy | A | MSESELENOMETHIONINE | F - 111 |
1khy_A_85 | 1khy | A | MSESELENOMETHIONINE | V - 112 |
1khy_A_85 | 1khy | A | MSESELENOMETHIONINE | L - 113 |
1khy_A_85 | 1khy | A | MSESELENOMETHIONINE | A - 115 |
Clusters included in this Subclass |
CLUSTER: HH.7.17 |