Information on SUBCLASS 0.1.38 |
Subclass Accession number: 38
Subclass: 0.1.38 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.14 (>75 %) 1.14.14 (>50 %) 1.14.14.1 GO : GO:0003677 (>50 %) GO:0003916 (>50 %) GO:0003918 (>50 %) GO:0004497 (>50 %) GO:0016705 (>50 %) GO:0016712 (>50 %) GO:0016853 (>50 %) GO:0050381 (>50 %) SCOP : 48263 (>75 %) 48264 (>75 %) 48265 (>75 %) 55873 (>50 %) 55874 (>50 %) 55879 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 11.8 +/- 12.4 Average RMSD (Å) : 0.467 +/- 0.208 Consensus geometry
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Consensus Sequence: | hXXp |
(φψ)-conformation: | aaba |
Pattern: | [FG] | [AI] | [KST] | [ILV] | [CFV] | x | [AGI] | x | x | [DKT] | [EKR] | [FV] | x | [LV] | x | [DTV] | x |
Conservation: | 0.687 | 0.509 | 0.221 | 1.684 | -0.218 | 0.366 | -1.242 | -0.949 | -0.151 | -0.364 | 1.245 | 0.785 | -1.096 | 1.663 | -1.388 | -0.803 | -0.949 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1pvg_A_145 | 1pvg | A | 145 | 161 | GAKLCNIFSTEFILETA | HHHHHHHTEEEEEEEEE | aaaaaaaababbbbbbb |
1q4r_A_84 | 1q4r | A | 89 | 105 | FATIFLGSLDKVLVIDY | HHHHHHHTEEEEEEEEE | aaaaaaaaxabbbbbbb |
1s16_A_1115 | 1s16 | A | 1115 | 1131 | GISVVNALSKRVEVNVR | HHHHHHHTEEEEEEEEE | aaaaaaaababbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pvg_A_145 | 1pvg | A | MGMAGNESIUM ION | G - 145 |
1pvg_A_145 | 1pvg | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | G - 145 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | A - 146 |
1pvg_A_145 | 1pvg | A | MGMAGNESIUM ION | A - 146 |
1pvg_A_145 | 1pvg | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | A - 146 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | K - 147 |
1pvg_A_145 | 1pvg | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | K - 147 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | L - 148 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | N - 150 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | I - 151 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | F - 152 |
1pvg_A_145 | 1pvg | A | MSESELENOMETHIONINE | S - 153 |
1s16_A_1115 | 1s16 | A | MGMAGNESIUM ION | G - 1115 |
1s16_A_1115 | 1s16 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | G - 1115 |
1s16_A_1115 | 1s16 | A | MGMAGNESIUM ION | I - 1116 |
1s16_A_1115 | 1s16 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | I - 1116 |
1s16_A_1115 | 1s16 | A | MGMAGNESIUM ION | S - 1117 |
1s16_A_1115 | 1s16 | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | S - 1117 |
Clusters included in this Subclass |
CLUSTER: HE.2.91 |