Information on SUBCLASS 5.35.1 |
Subclass Accession number: 396
Subclass: 5.35.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2.1 (>50 %) 2.1.1 (>50 %) 2.1.1.723.2 (>75 %) 7 (>75 %) GO : GO:0003676 (>75 %) GO:0003677 (>50 %) GO:0008168 (>50 %) GO:0008170 (>50 %) GO:0008757 (>50 %) GO:0009008 (>50 %) GO:0016741 (>50 %) GO:0016798 (>75 %) SCOP : 53334 (>50 %) 53335 (>50 %) 53377 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 25.5 +/- 19.9 Average RMSD (Å) : 0.933 +/- 0.416 Consensus geometry
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Consensus Sequence: | XpXXXcphp |
(φψ)-conformation: | aappplaba |
Pattern: | [CI] | [FIL] | [D] | [FLT] | [LV] | x | [KQS] | [HLV] | [EP] | [DNP] | [DK] | [ST] | [IV] | [QT] | [L] | [AIV] | [IPV] |
Conservation: | 0.870 | -0.250 | 2.654 | -0.977 | 0.173 | -1.461 | -0.412 | -1.219 | 0.113 | -0.493 | 0.020 | 0.279 | 0.859 | -0.131 | 1.202 | -0.412 | -0.815 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g60_A_12 | 1g60 | A | 12 | 28 | CFDFLDQVENKSVQLAV | HHHHHHHS-TT-EEEEE | aaaaaaaxxxlababbb |
1nw6_A_47 | 1nw6 | A | 47 | 63 | CLDTLAKLPDDSVQLII | HHHHHHTS-TT-EEEEE | aaaaaaabxplababbx |
2mas_A_105 | 2mas | A | 109 | 125 | IIDLVMSHEPKTITLVP | HHHHHHHS-TT-EEEEE | aaaaaaaxxplabbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g60_A_12 | 1g60 | A | SAMS-ADENOSYLMETHIONINE | C - 12 |
1g60_A_12 | 1g60 | A | SAMS-ADENOSYLMETHIONINE | F - 13 |
1nw6_A_47 | 1nw6 | A | SFGADENOSYL-ORNITHINE | C - 47 |
1nw6_A_47 | 1nw6 | A | SFGADENOSYL-ORNITHINE | L - 48 |
Clusters included in this Subclass |
CLUSTER: HE.5.189 |