Information on SUBCLASS 5.40.1 |
Subclass Accession number: 401
Subclass: 5.40.1 ![]() Type: HE alpha-beta DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 2.7 (>50 %) 2.7 (>75 %) GO : GO:0003677 (>75 %) GO:0003684 (>75 %) GO:0005524 (>50 %) GO:0016301 (>50 %) GO:0016301 (>75 %) GO:0016772 (>50 %) GO:0016772 (>75 %) GO:0016788 (>50 %) GO:0016791 (>50 %) GO:0030554 (>50 %) GO:0042578 (>50 %) SCOP : 48333 (>75 %) 48334 (>75 %) 48335 (>75 %) 52539 (>75 %) 52540 (>75 %) 52686 (>75 %) 53253 (>50 %) 53254 (>50 %) 53267 (>50 %) |
Number of loops: 2 Average sequence ID (%) : 12.5 +/- 0.0 Average RMSD (Å) : 0.400 +/- 0.000 Consensus geometry
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Consensus Sequence: | phGXpphhh |
(φψ)-conformation: | aalaaappb |
Pattern: | [AP] | [AV] | [DE] | [A] | [AL] | [AR] | [EQ] | [IL] | [G] | [MR] | [EH] | [DR] | [IV] | [MP] | [IL] | x |
Conservation: | -0.532 | -0.742 | 0.728 | 0.938 | -1.162 | -0.952 | 0.518 | 0.098 | 2.617 | -0.742 | 0.308 | -0.952 | 0.518 | -0.742 | 0.098 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1jx6_A_266 | 1jx6 | A | 272 | 286 | AVDALAELGREDIMI. | HHHHHHHHT-TTSEE. | aaaaaaaavaaaxxb. |
1ufy_A_58 | 1ufy | A | 58 | 73 | PAEAARQIGMHRVPLL | HHHHHHHTTGGGS-EE | aaaaaaaavaaaxwbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jx6_A_266 | 1jx6 | A | AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL | T - 266 |
1jx6_A_266 | 1jx6 | A | AI23A-METHYL-5,6-DIHYDRO-FURO[2,3-D][1,3,2]DIOXABOROLE-2, 2,6,6A-TETRAOL | D - 267 |
1ufy_A_58 | 1ufy | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Q - 64 |
1ufy_A_58 | 1ufy | A | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | I - 65 |
Clusters included in this Subclass |
CLUSTER: HE.6.122 |