Information on SUBCLASS 6.22.1 |
Subclass Accession number: 433
Subclass: 6.22.1 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0016462 (>75 %) GO:0016817 (>75 %) GO:0016818 (>75 %) SCOP : 52539 (>75 %) 52540 (>75 %) 52686 (>75 %) 55810 (>50 %) 55811 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 11.1 +/- 12.2 Average RMSD (Å) : 1.267 +/- 0.404 Consensus geometry
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Consensus Sequence: | pXXhphXXhX |
(φψ)-conformation: | aalbppbpbb |
Pattern: | [NPR] | [ER] | x | [ACV] | [IVY] | x | [KRY] | [ERS] | [ACY] | x | x | [EK] | x | x | [LVY] | [DE] | [IVY] | [GRT] | [EP] | [PV] | [AER] | x | [IL] | [FY] |
Conservation: | -0.549 | 0.820 | -1.206 | -0.079 | 0.108 | -1.112 | -0.267 | -0.361 | -0.361 | -0.830 | -1.112 | 1.204 | -0.830 | 0.720 | -0.267 | 1.689 | 0.108 | -0.924 | 1.241 | -0.094 | -0.549 | -1.018 | 1.131 | 2.539 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d5r_A_169 | 1d5r | A | 172 | 195 | RRYVYYYSYLLKNHLDYRPVALLF | HHHHHHHHHHHHHT------EEEE | aaaaaaaaaaaaalbbxbpbxbbx |
1hzt_A_76 | 1hzt | A | 76 | 99 | NEDAVIRRCRYELGVEITPPESIY | HHHHHHHHHHHHH---BS--EEEE | aaaaaaaaaaaaalbxbxppxxab |
1viu_A_93 | 1viu | A | 93 | 116 | PEVCIRKEAIEETGYEVGEVRKLF | HHHHHHHHHHHHHS------EEEE | aaaaaaaaaaaaavxxxFxbbxae |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d5r_A_169 | 1d5r | A | TARD(-)-TARTARIC ACID | Q - 171 |
1viu_A_93 | 1viu | A | MSESELENOMETHIONINE | L - 118 |
Clusters included in this Subclass |
CLUSTER: HE.6.118 |