Information on SUBCLASS 2.2.35 |
Subclass Accession number: 505
Subclass: 2.2.35 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 13.6 Average RMSD (Å) : 0.800 +/- 0.436 Consensus geometry
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Consensus Sequence: | hpppXX |
(φψ)-conformation: | abaabb |
Pattern: | [EQW] | [AKT] | [LV] | [NS] | [DE] | [DS] | [EFL] | [ANV] | [FIL] | [GR] | [FVY] | x | [AQ] | [GLT] | x |
Conservation: | -0.053 | -0.533 | 0.781 | 1.002 | 2.031 | 1.111 | -1.206 | -1.110 | 0.235 | 0.430 | 0.331 | -0.533 | 0.116 | -1.398 | -1.206 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1idp_A_86 | 1idp | A | 93 | 107 | EKVSEDEVIGYHQLR | EEEETTEEEEEEEEE | bxabaabbbbxbxbb |
1k24_A_88 | 1k24 | A | 100 | 114 | QTLSDSLNFRVGAGL | EEEETTEEEEEEEEE | bxabaabbbbbbbbb |
2eng_*_62 | 2eng | - | 62 | 76 | WAVNDDFALGFAATS | EEEETTEEEEEEEEE | bxabaabbbbbbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1k24_A_88 | 1k24 | A | ZNZINC ION | R - 89 |
1k24_A_88 | 1k24 | A | 1PEPENTAETHYLENE GLYCOL | T - 94 |
Clusters included in this Subclass |
CLUSTER: HA.3.78 |