Information on SUBCLASS 3.29.1 |
Subclass Accession number: 3004
Subclass: 3.29.1 Type: EH beta-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 23.0 +/- 22.1 Average RMSD (Å) : 0.475 +/- 0.236 Consensus geometry
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Consensus Sequence: | XhVXcpX |
(φψ)-conformation: | bbebpaa |
Pattern: | x | [FI] | [AEK] | [G] | x | [ILMW] | [IV] | [GS] | [DGNT] | x | [APSV] | [DEH] | [FLT] | x | [EK] | [ALMT] | [LV] | [DST] | [FIL] | [ACT] | x |
Conservation: | -0.681 | 0.544 | -0.472 | 3.026 | -0.323 | -0.360 | 1.267 | 0.999 | -0.589 | -1.321 | -0.955 | 0.427 | -0.557 | -0.682 | 1.037 | -0.726 | 0.472 | -0.072 | 0.166 | -0.107 | -1.092 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h2b_A_303 | 1h2b | A | 303 | 323 | SFEGSLVGNYVELHELVTLAL | EEEE--S--HHHHHHHHHHHH | bbbxbbebxaaaaaaaaaaaa |
1llu_A_286 | 1llu | A | 286 | 306 | HIAGSIVGTRADLQEALDFAG | EEEE--S--HHHHHHHHHHHH | bbbxbbebxaaaaaaaaaaaa |
1uuf_A_288 | 1uuf | A | 288 | 308 | AIAGSMIGGIPETQEMLDFCA | EEEE--S--HHHHHHHHHHHH | bbbbbbebxaaaaaaaaaaaa |
1vj0_A_308 | 1vj0 | A | 308 | 328 | TFKGIWVSDTSHFVKTVSITS | EEEE-----HHHHHHHHHHHH | bbbxbbebbaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h2b_A_303 | 1h2b | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | S - 307 |
1h2b_A_303 | 1h2b | A | OCAOCTANOIC ACID (CAPRYLIC ACID) | L - 308 |
1h2b_A_303 | 1h2b | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | L - 308 |
1h2b_A_303 | 1h2b | A | OCAOCTANOIC ACID (CAPRYLIC ACID) | V - 309 |
1h2b_A_303 | 1h2b | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | V - 309 |
1llu_A_286 | 1llu | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | S - 290 |
1llu_A_286 | 1llu | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 291 |
1llu_A_286 | 1llu | A | EDO1,2-ETHANEDIOL | I - 291 |
1llu_A_286 | 1llu | A | ZNZINC ION | V - 292 |
1llu_A_286 | 1llu | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 292 |
1llu_A_286 | 1llu | A | EDO1,2-ETHANEDIOL | V - 292 |
1llu_A_286 | 1llu | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 293 |
1uuf_A_288 | 1uuf | A | ZNZINC ION | I - 294 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h2b_A_303 | 1h2b | A | NJ1COFACTOR BINDING SITE FOR CHAIN A | L - 308 |
Clusters included in this Subclass |
CLUSTER: EH.4.249 |