Information on SUBCLASS 13.2.1 |
Subclass Accession number: 3589
Subclass: 13.2.1 ![]() Type: EH beta-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 76.4 +/- 9.9 Average RMSD (Å) : 0.340 +/- 0.207 Consensus geometry
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Consensus Sequence: | AhSREQpNXpGXpMYIQ |
(φψ)-conformation: | bbaaabbpaalppppaa |
Pattern: | [f] | [r] | [lv] | [dt] | [fy] | [a] | [iv] | [s] | [r] | [e] | [q] | [ktv] | [n] | [adep] | [akq] | [g] | [eg] | [kr] | [m] | [y] | [i] | [q] | [dt] | [r] | [mv] |
Conservation: | 1.204 | 0.616 | -0.819 | -0.933 | 0.518 | 0.028 | -0.261 | 0.028 | 0.616 | 0.616 | 0.616 | -1.760 | 1.204 | -1.810 | -1.528 | 1.204 | -1.297 | -0.253 | 0.616 | 1.792 | 0.028 | 0.616 | -1.008 | 0.616 | -0.653 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fnc_*_227 | 1fnc | - | 227 | 251 | FRLDFAVSREQTNEKGEKMYIQTRM | EEEEEEETTT-B-TT--B--HHHHH | bbbbbbxaaabbxaavxxxxaaaaa |
1gaw_A_227 | 1gaw | A | 227 | 251 | FRVDYAVSREQTNAAGERMYIQTRM | EEEEEEETTT-B-TT--B--HHHHH | bbbbbbbaaabbxaavxpxxaaaaa |
1ogi_A_216 | 1ogi | A | 216 | 240 | FRLTYAISREQKNPQGGRMYIQDRV | EEEEEEETTT-B-TTSSB--HHHHH | bbbbbbbaaabbxaavxxxbaaaaa |
1qfz_A_221 | 1qfz | A | 221 | 245 | FRLDFAVSREQVNDKGEKMYIQTRM | EEEEEEETTT-B-TT--B--HHHHH | bbbbxbxaaabbxaavxpxxaaaaa |
1sm4_A_275 | 1sm4 | A | 275 | 299 | FRLDFAVSREQTNEKGEKMYIQTRM | EEEEEEETTT-B-TTS-B--HHHHH | bbbbxbbaaNbbxaavxxxxaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ogi_A_216 | 1ogi | A | AC2SO4 BINDING SITE FOR CHAIN A | S - 223 |
1ogi_A_216 | 1ogi | A | AC2SO4 BINDING SITE FOR CHAIN A | R - 224 |
1ogi_A_216 | 1ogi | A | AC2SO4 BINDING SITE FOR CHAIN A | R - 233 |
1ogi_A_216 | 1ogi | A | AC2SO4 BINDING SITE FOR CHAIN A | Y - 235 |
Clusters included in this Subclass |
CLUSTER: EH.12.9 |