Information on SUBCLASS 4.4.3 |
Subclass Accession number: 4785
Subclass: 4.4.3 ![]() Type: HH alpha-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation GO : GO:0003955 (>75 %) GO:0016651 (>75 %) SCOP : 52171 (>75 %) 52218 (>75 %) 52235 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 24.8 +/- 30.3 Average RMSD (Å) : 0.640 +/- 0.134 Consensus geometry
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Consensus Sequence: | XpGphXXX |
(φψ)-conformation: | aalappaa |
Pattern: | [ey] | [EGNP] | x | [DEK] | x | x | [ael] | [AER] | [LTY] | [KL] | [EKQ] | [GR] | [HKNRS] | [GL] | [ADPS] | [aps] | [AD] | [HIL] | [ATV] | [ADER] | [eq] | x | [AKL] | [AKT] | x | x | [AES] |
Conservation: | -0.231 | -0.603 | -0.363 | 1.689 | -0.886 | -1.388 | -1.126 | -0.036 | 0.145 | 0.163 | 2.065 | 2.284 | 0.124 | -0.627 | -0.348 | -0.511 | 1.885 | -0.100 | 0.739 | -0.491 | 0.064 | -0.619 | -0.466 | 0.129 | -0.436 | -1.663 | 0.607 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1brw_A_250 | 1brw | A | 251 | 277 | LEVKEAIETLKGNGPHDLTELCLTLGS | HHHHHHHHHHTT-S-HHHHHHHHHHHH | aaaaaaaaaaavaxxaaaaaaaaaaaa |
1d4a_A_67 | 1d4a | A | 67 | 93 | YPAESVLAYKEGHLSPDIVAEQKKLEA | HHHHHHHHHHHT-B-HHHHHHHHHHHH | aaaaaaaaaaavaxpaaaaaaaaaaaa |
1khd_A_279 | 1khd | A | 281 | 307 | ENRDILARLLQGKGDAAHARQVAANVA | HHHHHHHHHHTT-S-HHHHHHHHHHHH | aaaaaaaaaaavaxxaaaaaaaaaaaa |
1qr2_A_67 | 1qr2 | A | 67 | 93 | YGVETHEAYKQRSLASDITDEQKKVRE | HHHHHHHHHHTT-B-HHHHHHHHHHHH | aaaaaaaaaaalaxxaaaaaaaaaaaa |
1qrd_A_67 | 1qrd | A | 67 | 93 | YPVESSLAYKEGRLSPDIVAEQKKLEA | HHHHHHHHHHHT-B-HHHHHHHHHHHH | aaaaaaaaaaavaxpaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1brw_A_250 | 1brw | A | CACALCIUM ION | E - 252 |
1brw_A_250 | 1brw | A | CACALCIUM ION | E - 255 |
1brw_A_250 | 1brw | A | CACALCIUM ION | L - 268 |
1d4a_A_67 | 1d4a | A | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 67 |
1d4a_A_67 | 1d4a | A | FADFLAVIN-ADENINE DINUCLEOTIDE | P - 68 |
1qr2_A_67 | 1qr2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 68 |
1qr2_A_67 | 1qr2 | A | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 71 |
Clusters included in this Subclass |
CLUSTER: HH.4.177 |
CLUSTER: HH.6.225 |