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Information on SUBCLASS 4.12.2
Subclass Accession number: 4813
Subclass: 4.12.2 PSSM
Type: HH alpha-alpha
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
SCOP : 47026 (>75 %)  
Number of loops: 5

Average sequence ID (%) : 20.8 +/- 21.6
Average RMSD (Å) : 0.520 +/- 0.164

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: pXpcXXpE
(φψ)-conformation: aapgppaa
Pattern: [fkw][DEG][EKQR][AKRS][IKL][QRTWY][ADEKN][aw][HVWY][AEKNS][es][HLV][EKR][DGN]x[anps][kr][DE][DEK][ASV][EMQ][KM][AER][IY][IKLV]
Conservation:-0.9370.4940.632-0.315-0.852-1.054-0.695-0.7720.168-0.615-0.652-0.7701.0450.688-0.671-1.533-0.1662.4841.1910.2100.0120.745-0.4092.250-0.477
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1h4r_A_1811h4r   A184208WEERITAWYAEHRGRARDEAEMEYLHHHHHHHHHHTTTT--HHHHHHHHHaaaaaaaaaaaapvxxaaaaaaaaa
1hb6_A_491hb6   A5074KGKAKWDAWNELKGTSKEDAMKAYIHHHHHHHHHHHTTT--HHHHHHHHHaaaaaaaaaaaapgxxaaaaaaaaa
1hbk_A_511hbk   A5276IDRKKYEAWKSVENLNREDAQKRYVHHHHHHHHHHHTTT--HHHHHHHHHaaaaaaaaaaaapvxxaaaaaaaaa
1j19_A_1651j19   A168192WEERIQNWHEEHRGMLREDSMMEYLHHHHHHHHHHTTTT--HHHHHHHHHaaaaaaaaaaaapgxxaaaaaaaaa
1j97_A_491j97   A4973FEQSLRKRVSLLKDLPIEKVEKAIKHHHHHHHHHHTTTT-BHHHHHHHHHaaaaaaaaaaaapvxxaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1hbk_A_511hbk   A     COACOENZYME A I - 52
1hbk_A_511hbk   A     MYRMYRISTIC ACID I - 52
1hbk_A_511hbk   A     COACOENZYME A D - 53
1hbk_A_511hbk   A     COACOENZYME A K - 56
1hbk_A_511hbk   A     MYRMYRISTIC ACID K - 56
1hbk_A_511hbk   A     COACOENZYME A W - 60
1hbk_A_511hbk   A     COACOENZYME A Y - 75
1hbk_A_511hbk   A     MYRMYRISTIC ACID Y - 75
1j97_A_491j97   A     BFDASPARTATE BERYLLIUM TRIFLUORIDE F - 49

Clusters included in this Subclass
CLUSTER: HH.5.195
CLUSTER: HH.7.123