Information on SUBCLASS 5.35.1 |
Subclass Accession number: 4927
Subclass: 5.35.1 ![]() Type: HH alpha-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 51.0 +/- 3.9 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | EXpXGTDXp |
(φψ)-conformation: | aabpebpaa |
Pattern: | [DE] | x | x | [AV] | [DEK] | x | [D] | [A] | [QR] | [AI] | [L] | [FY] | [EKQ] | [A] | [G] | [E] | x | [KR] | [KW] | [G] | [T] | [D] | [EL] | [DEN] | [KV] | [F] | [IT] | [ET] | [I] | [L] | [CGT] | [LT] |
Conservation: | 0.400 | -1.298 | -1.076 | -0.627 | -0.550 | -1.423 | 1.570 | 0.448 | -0.066 | -0.902 | 0.448 | 0.968 | -0.363 | 0.448 | 1.570 | 1.009 | -1.485 | 0.203 | 0.085 | 1.570 | 1.009 | 1.570 | -1.229 | -0.363 | -0.960 | 1.570 | -0.811 | -0.610 | 0.448 | 0.448 | -1.298 | -0.701 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1axn_*_173 | 1axn | - | 173 | 204 | EHLAKQDAQILYKAGENRWGTDEDKFTEILCL | HHHHHHHHHHHHHHTTTSSS--HHHHHHHHHH | aaaaaaaaaaaaaaaaabxebxaaaaaaaaaa |
1g5n_A_167 | 1g5n | A | 167 | 198 | DAQVELDAQALFQAGELKWGTDEEKFITILGT | HHHHHHHHHHHHHHTTTSSS--HHHHHHHHHH | aaaaaaaaaaaaaaaaabxebxaaaaaaaaaa |
1hm6_A_196 | 1hm6 | A | 196 | 227 | DDLADTDARALYEAGERRKGTDLNVFITILTT | HHHHHHHHHHHHHHTTTSSS--HHHHHHHHHH | aaaaaaaaaaaaaaaaabxMxbaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1axn_*_173 | 1axn | * | CACALCIUM ION | A - 186 |
1axn_*_173 | 1axn | * | CACALCIUM ION | G - 187 |
1axn_*_173 | 1axn | * | CACALCIUM ION | E - 188 |
1axn_*_173 | 1axn | * | CACALCIUM ION | N - 189 |
1axn_*_173 | 1axn | * | CACALCIUM ION | R - 190 |
1axn_*_173 | 1axn | * | CACALCIUM ION | W - 191 |
1axn_*_173 | 1axn | * | CACALCIUM ION | G - 192 |
1axn_*_173 | 1axn | * | CACALCIUM ION | T - 193 |
1axn_*_173 | 1axn | * | CACALCIUM ION | D - 194 |
1axn_*_173 | 1axn | * | CACALCIUM ION | E - 195 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | A - 180 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | G - 181 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | E - 182 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | L - 183 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | K - 184 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | W - 185 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | G - 186 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | T - 187 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | D - 188 |
1g5n_A_167 | 1g5n | A | CACALCIUM ION | E - 189 |
Clusters included in this Subclass |
CLUSTER: HH.7.118 |