|
|
|
|
|
|
|
| Information on SUBCLASS 0.1.52 |
|
Subclass Accession number: 5239
Subclass: 0.1.52 
Type: HE alpha-beta DB: ArchDB95 Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 8.9 +/- 13.1 Average RMSD (Å) : 0.633 +/- 0.153 Consensus geometry
|
| Consensus Sequence: | pchX |
| (φψ)-conformation: | aabb |
| Pattern: | [ARS] | x | [IV] | x | x | x | [AY] | [DKS] | [DK] | [FGI] | x | [ITV] | [HLY] | [ALY] | [IV] |
| Conservation: | -0.282 | -0.688 | 1.848 | -0.688 | -0.485 | -0.891 | 0.904 | -0.079 | 1.051 | -1.196 | -1.094 | 0.327 | 0.124 | -0.688 | 1.838 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1g8s_A_87 | 1g8s | A | 90 | 104 | SHVADIADKGIVYAI | HHHHHHTTTSEEEEE | aaaaaaaaabbbxbx |
| 1qjw_A_191 | 1qjw | A | 203 | 217 | RQIVVEYSDIRTLLV | HHHHHHTTTS-EEEE | aaaaaaaaabxbbbb |
| 2dpm_A_244 | 2dpm | A | 244 | 258 | ALVEELYKDFNIHYV | HHHHHHTTTSEEEEE | aaaaaaaaabxxxbb |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1g8s_A_87 | 1g8s | A | METMETHIONINE | T - 87 |
| 1g8s_A_87 | 1g8s | A | METMETHIONINE | T - 88 |
| 1g8s_A_87 | 1g8s | A | METMETHIONINE | P - 89 |
| 1qjw_A_191 | 1qjw | A | CDCADMIUM ION | E - 208 |
| 1qjw_A_191 | 1qjw | A | CDCADMIUM ION | Y - 209 |
| Clusters included in this Subclass |
| CLUSTER: HE.5.270 |
| For any comment or web-related incidence, send an email to the webmaster. |
|