Information on SUBCLASS 2.4.8 |
Subclass Accession number: 5394
Subclass: 2.4.8 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 1.4 (>75 %) 1.4.3 (>75 %) 1.4.3.6 SCOP : 49993 (>75 %) 49998 (>75 %) 49999 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 17.6 +/- 17.8 Average RMSD (Å) : 0.760 +/- 0.305 Consensus geometry
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Consensus Sequence: | XpGXpp |
(φψ)-conformation: | aalabb |
Pattern: | x | [afv] | [EQY] | x | [an] | x | [den] | x | [AILM] | [EHKN] | [AGKQ] | [AET] | [G] | x | [ty] | x | [IV] |
Conservation: | -0.494 | -0.716 | 0.465 | -1.164 | -0.467 | -0.778 | -0.358 | -0.597 | 0.190 | 0.288 | -0.276 | 0.239 | 3.062 | -0.520 | 0.215 | -0.546 | 1.457 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ed8_A_335 | 1ed8 | A | 348 | 364 | AVQRALEFAKKEGNTLV | HHHHHHHHHHHHSSEEE | aaaaaaaaaaaavabxb |
1ehi_A_17 | 1ehi | A | 23 | 39 | SAQNFYNAIEATGKYEI | HHHHHHHHHHHHSSEEE | aaaaaaaaaaaavabbb |
1f0k_A_288 | 1f0k | A | 288 | 304 | QQYWNALPLEKAGAAKI | HHHHHHHHHHHTTSEEE | aaaaaaaaaaaavabbb |
1kqo_A_22 | 1kqo | A | 27 | 43 | LFELAKDYMNGTGRYTV | HHHHHHHHHHHTSSEEE | aaaaaaaaaaaavabbx |
1nup_A_20 | 1nup | A | 25 | 41 | MFEVARDHLHQTGMYQV | HHHHHHHHHHHTTSEEE | aaaaaaaaaaaavabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ehi_A_17 | 1ehi | A | PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID | V - 19 |
1ehi_A_17 | 1ehi | A | PHY1(S)-AMINOETHYL-(2-CARBOXYPROPYL)PHOSPHORYL-PHOSPHINIC ACID | S - 23 |
1kqo_A_22 | 1kqo | A | DNDNICOTINIC ACID ADENINE DINUCLEOTIDE | M - 23 |
1kqo_A_22 | 1kqo | A | DNDNICOTINIC ACID ADENINE DINUCLEOTIDE | H - 24 |
1kqo_A_22 | 1kqo | A | DNDNICOTINIC ACID ADENINE DINUCLEOTIDE | L - 27 |
1kqo_A_22 | 1kqo | A | DNDNICOTINIC ACID ADENINE DINUCLEOTIDE | S - 49 |
1nup_A_20 | 1nup | A | NMNBETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE | S - 47 |
Clusters included in this Subclass |
CLUSTER: HE.2.94 |