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Information on SUBCLASS 5.7.3
Subclass Accession number: 5766
Subclass: 5.7.3 PSSM
Type: HE alpha-beta
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 2.1 (>75 %)  2.1.1 (>75 %)  2.1.1.773.1 (>50 %)  3.1.6 (>50 %)  
GO : GO:0004065 (>50 %)  GO:0008168 (>75 %)  GO:0008171 (>75 %)  GO:0008276 (>75 %)  GO:0008484 (>50 %)  GO:0008757 (>75 %)  GO:0016741 (>75 %)  GO:0016788 (>50 %)  
SCOP : 53334 (>75 %)  53335 (>75 %)  53354 (>75 %)  53648 (>50 %)  53649 (>50 %)  53653 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 20.3 +/- 20.5
Average RMSD (Å) : 1.100 +/- 0.400

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: pXGXXppXh
(φψ)-conformation: aalaaaabb
Pattern: [AES][AT][TV][AG][GNT][ILV][LMT][AT][AG][ILM][AGK][DQS]x[G]xx[DEN][DEN][TV][ILV][AFV][I]x
Conservation:-0.6360.0690.0690.609-0.6360.420-0.5400.1160.1930.324-1.019-0.444-1.4033.298-0.745-1.1150.3240.3240.2770.420-1.1151.571-0.362
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1auk_*_2451auk   -256278AAVGTLMTAIGDLGLLEETLVIFHHHHHHHHHHHHTT-GGGEEEEEaaaaaaaaaaaaalaaaabxbbb
1f2d_A_2041f2d   A204226STTAGILAGMAQYGRQDDVIAIDHHHHHHHHHHGGGT-GGGEEEEEaaaaaaaaaaaaavaaaaxbxbx
1fsu_*_2611fsu   -275297EAVGNVTAALKSSGLWNNTVFIFHHHHHHHHHHHHTT-GGGEEEEEaaaaaaaaaaaaavaaaabbxbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1f2d_A_2041f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 204
1f2d_A_2041f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 205
1f2d_A_2041f2d   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 206
1fsu_*_2611fsu   *     NAGN-ACETYL-D-GLUCOSAMINE L - 272
1fsu_*_2611fsu   *     NAGN-ACETYL-D-GLUCOSAMINE E - 275
1fsu_*_2611fsu   *     NAGN-ACETYL-D-GLUCOSAMINE A - 276
1fsu_*_2611fsu   *     NAGN-ACETYL-D-GLUCOSAMINE N - 279

Clusters included in this Subclass
CLUSTER: HE.7.127