Information on SUBCLASS 9.2.1 |
Subclass Accession number: 5986
Subclass: 9.2.1 ![]() Type: HE alpha-beta DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 4 Average sequence ID (%) : 39.4 +/- 21.4 Average RMSD (Å) : 0.425 +/- 0.150 Consensus geometry
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Consensus Sequence: | AFpTPSGhPhXXh |
(φψ)-conformation: | aapbaagpppabb |
Pattern: | [DENS] | x | [FL] | x | [DKR] | [KQ] | [AS] | x | [DENT] | [FL] | [AG] | [DNV] | x | [L] | [KLM] | [FPV] | [A] | [F] | [DHRT] | [T] | [P] | [S] | [GK] | [IV] | [P] | [DWY] | [ANPS] | x | [ILV] | x |
Conservation: | -0.349 | -1.362 | 0.016 | -0.524 | -0.414 | 0.271 | 0.112 | -0.938 | -0.513 | -0.002 | 0.016 | -0.766 | -1.297 | 0.794 | -0.646 | -1.038 | 0.794 | 1.839 | -0.970 | 1.317 | 2.362 | 0.794 | -0.009 | 0.533 | 2.362 | -0.312 | -0.872 | -1.134 | 0.118 | -0.182 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fo3_A_349 | 1fo3 | A | 349 | 378 | SLFLRKAEDFGNRLMPAFRTPSKIPYSDVN | HHHHHHHHHHHHHHGGGG-SSS----SEEE | aaaaaaaaaaaaaaaaaaxbaavxxxabbx |
1hcu_A_127 | 1hcu | A | 131 | 160 | NSLLRQAQTLANGLKVAFTTPSGVPDPTVF | HHHHHHHHHHHHHHGGGG-SSSS---SEEE | aaaaaaaaaaaaaaaaaaaxaagxpxabbb |
1kre_A_149 | 1kre | A | 153 | 182 | DGLLDQSRNLADVLKFAFDTPSGVPYNNIN | HHHHHHHHHHHHHHGGGG-SSSS---SEEE | aaaaaaaaaaaaaaaaaaxbaagxxxabbb |
1nxc_A_301 | 1nxc | A | 301 | 330 | EIFRKKAVELGVKLLPAFHTPSGIPWALLN | HHHHHHHHHHHHHHGGGG-SSSS---SEEE | aaaaaaaaaaaaaaawaaxbaavxxxabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hcu_A_127 | 1hcu | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 127 |
1hcu_A_127 | 1hcu | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 128 |
1hcu_A_127 | 1hcu | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 129 |
1hcu_A_127 | 1hcu | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 132 |
1kre_A_149 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 182 |
Clusters included in this Subclass |
CLUSTER: HE.12.5 |