Information on SUBCLASS 2.2.35 |
Subclass Accession number: 6080
Subclass: 2.2.35 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 18.2 +/- 16.6 Average RMSD (Å) : 0.433 +/- 0.058 Consensus geometry
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Consensus Sequence: | XpXpGX |
(φψ)-conformation: | bbaaeb |
Pattern: | [LV] | x | x | [SV] | [DRS] | [AET] | [EKS] | [G] | x | [IKL] | x |
Conservation: | 0.606 | -0.439 | -0.064 | -0.264 | -0.439 | -0.367 | 0.064 | 2.798 | -0.727 | -0.583 | -0.583 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1acc_*_619 | 1acc | - | 619 | 629 | VINSSTEGLLL | EEEE-SSEEEE | xabbbaaebbb |
1fgu_A_217 | 1fgu | A | 224 | 234 | LELVDESGEIR | EEEE-SS-EEE | bbbbbaaebbx |
1l8b_A_149 | 1l8b | A | 153 | 163 | VVNVRAKGDKI | EEEE-SSEEEE | bbbbbaaexbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1l8b_A_149 | 1l8b | A | MGP7-METHYL-GUANOSINE-5'-TRIPHOSPHATE | N - 155 |
1l8b_A_149 | 1l8b | A | MGP7-METHYL-GUANOSINE-5'-TRIPHOSPHATE | R - 157 |
1l8b_A_149 | 1l8b | A | MGP7-METHYL-GUANOSINE-5'-TRIPHOSPHATE | K - 162 |
1l8b_A_149 | 1l8b | A | MGP7-METHYL-GUANOSINE-5'-TRIPHOSPHATE | W - 166 |
Clusters included in this Subclass |
CLUSTER: HA.4.202 |