Information on SUBCLASS 2.5.11 |
Subclass Accession number: 6147
Subclass: 2.5.11 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 3 Average sequence ID (%) : 11.9 +/- 12.0 Average RMSD (Å) : 0.667 +/- 0.153 Consensus geometry
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Consensus Sequence: | XXpXXL |
(φψ)-conformation: | bbllbb |
Pattern: | [ALW] | [IKM] | [RY] | x | [CFW] | [AFT] | x | [HLM] | [FT] | [DNY] | x | x | [L] | [DSY] |
Conservation: | -0.532 | -0.428 | 1.256 | -0.635 | 0.815 | -0.532 | -1.568 | -0.117 | 0.567 | -0.117 | -0.014 | -0.635 | 2.472 | -0.532 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1f4x_H_92 | 1f4x | H | 92 | 105 | AMYYCTRHFYAVLD | EEEEEEEEETTEEE | bxbbbbbxxvvbxa |
1fgy_A_281 | 1fgy | A | 281 | 294 | WKRRWFILTDNCLY | EEEEEEEEETTEEE | xbxbxxbxbllbbx |
1hkk_A_53 | 1hkk | A | 54 | 67 | LIYAFAGMTNHQLS | EEEEEEEEETTEEE | bbxbwxbbblvbpb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hkk_A_53 | 1hkk | A | AC2NAA BINDING SITE FOR CHAIN A | F - 58 |
1hkk_A_53 | 1hkk | A | AC8ZN2 BINDING SITE FOR CHAIN A | H - 64 |
Clusters included in this Subclass |
CLUSTER: HA.2.171 |