Information on SUBCLASS 6.16.2 |
Subclass Accession number: 6451
Subclass: 6.16.2 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 3.3 +/- 6.8 Average RMSD (Å) : 1.267 +/- 0.351 Consensus geometry
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Consensus Sequence: | XXXXpXcpXp |
(φψ)-conformation: | bbpaabappb |
Pattern: | x | [GTV] | x | x | x | x | x | [DGS] | [EGK] | [SY] | x | [DKN] | [KRT] | x | [QRT] | [LPT] | x | x | [FKL] | [AL] |
Conservation: | -1.052 | -0.849 | 0.774 | -0.646 | 0.977 | -1.052 | -0.241 | 0.977 | 0.165 | 1.158 | -0.849 | 1.585 | 1.180 | -1.661 | 0.774 | -0.646 | -0.241 | -0.849 | -0.849 | 1.346 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h10_A_6 | 1h10 | A | 9 | 28 | EGWLHKRGEYIKTWRPRYFL | EEEEEEE-SSS--EEEEEEE | bexbbbxpaaxaxxbwbxbb |
1o57_A_170 | 1o57 | A | 170 | 189 | TVSINYVSGSSNRIQTMSLA | EEEEEEE-SS--SEEEEEEE | xbbbbbbxaabaxpbbbbbp |
3lkf_A_32 | 3lkf | A | 36 | 55 | LTFNFIKDKSYDKDTLVLKA | EEEEEEEETTSSSEEEEEEE | bbxbxbxbaababxbbbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | K - 14 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 15 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | G - 16 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | E - 17 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | Y - 18 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | I - 19 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | K - 20 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 23 |
1h10_A_6 | 1h10 | A | ITSINOSITOL 1,3,4,5-TETRAKISPHOSPHATE | R - 25 |
1o57_A_170 | 1o57 | A | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | S - 177 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h10_A_6 | 1h10 | A | ITSITS BINDING SITE FOR CHAIN A | G - 16 |
1h10_A_6 | 1h10 | A | ITSITS BINDING SITE FOR CHAIN A | E - 17 |
Clusters included in this Subclass |
CLUSTER: HA.5.190 |
CLUSTER: HA.7.85 |