Information on SUBCLASS 8.6.1 |
Subclass Accession number: 6521
Subclass: 8.6.1 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() |
Number of loops: 5 Average sequence ID (%) : 9.2 +/- 11.5 Average RMSD (Å) : 0.780 +/- 0.409 Consensus geometry
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Consensus Sequence: | phhpXcpcpphX |
(φψ)-conformation: | bbppaaallpbb |
Pattern: | [ekrs] | [ALV] | [AGL] | [DNPST] | x | [ADGN] | [DRSTY] | [ADGK] | x | [fkt] | x | [ftvy] | [nqsy] |
Conservation: | -0.816 | 1.754 | 1.172 | 0.445 | -1.410 | 0.768 | -1.113 | 0.076 | -0.301 | -0.312 | 0.772 | -1.039 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bdy_A_27 | 1bdy | A | 34 | 46 | EALTTDRGKTLVQ | EE--GGGTT-EEE | bxxxaaavlxxbx |
1fi2_A_103 | 1fi2 | A | 108 | 120 | ILGSLDSGNKLYS | EE--GGGTT-EEE | bbxxaaavlxbxb |
1fid_*_266 | 1fid | - | 266 | 277 | KVGPEADKYRLT. | EE--GGGTT-EE. | bbxxaaallpxb. |
1h0d_B_88 | 1h0d | B | 94 | 106 | RLGDYGYAYTMDY | EE--GGGTT-EEE | bxxxaaallxbab |
1nrj_A_47 | 1nrj | A | 47 | 59 | SVANANTDGFDFN | EE-SGGGTT--EE | xbbbaaalvxxbb |
Clusters included in this Subclass |
CLUSTER: HA.8.38 |