Information on SUBCLASS 13.1.1 |
Subclass Accession number: 6600
Subclass: 13.1.1 ![]() Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : 1.18 (>75 %) 1.18.1 (>75 %) 1.18.1.2 GO : GO:0004324 (>75 %) GO:0005489 (>75 %) GO:0008937 (>75 %) GO:0016730 (>75 %) GO:0016731 (>75 %) SCOP : 50412 (>75 %) 63380 (>75 %) 63381 (>75 %) |
Number of loops: 5 Average sequence ID (%) : 80.5 +/- 5.0 Average RMSD (Å) : 0.360 +/- 0.182 Consensus geometry
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Consensus Sequence: | hIhDGhDKNGKPHKLRL |
(φψ)-conformation: | bbppebpaalbppppbp |
Pattern: | [S] | [IV] | [G] | [IV] | [IV] | [AP] | [DP] | [G] | [iv] | [D] | [AK] | [N] | [G] | [K] | [P] | [EH] | [K] | [LV] | [R] | [L] | [Y] | [S] |
Conservation: | -0.216 | -0.510 | 0.990 | -0.517 | -0.510 | -1.164 | -0.961 | 0.990 | -1.948 | 0.990 | -1.469 | 0.990 | 0.990 | 0.387 | 1.593 | -0.476 | 0.387 | -1.093 | 0.387 | -0.216 | 1.593 | -0.216 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fnc_*_75 | 1fnc | - | 75 | 96 | SVGVIPDGEDKNGKPHKLRLYS | EEEEE-SSB-TTS-B---EEEE | bbxbbwxebxaavbxpxxbxbx |
1gaw_A_75 | 1gaw | A | 75 | 96 | SIGVIADGVDKNGKPHKVRLYS | EEEEE-SSB-TTS-B---EEEE | bbbbbxxebxaavxwxxxbxbx |
1ogi_A_59 | 1ogi | A | 59 | 80 | SIGIIPPGVDKNGKPEKLRLYS | EEEEE-SSB-TTS-B---EEEE | bbbbbxxebxaavxpxxxbxbx |
1qfz_A_69 | 1qfz | A | 69 | 90 | SIGIVPDGIDKNGKPHKLRLYS | EEEEE-SSB-TTS-B---EEEE | bbxbbxxebxaavbwxxxbxbx |
1sm4_A_123 | 1sm4 | A | 123 | 144 | SIGVIADGVDANGKPHKLRLYS | EEEEE-SSB-TTS-B---EEEE | bbxbbxxebxaavbpxxxbxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ogi_A_59 | 1ogi | A | AC1FAD BINDING SITE FOR CHAIN A | R - 77 |
1ogi_A_59 | 1ogi | A | AC1FAD BINDING SITE FOR CHAIN A | L - 78 |
1ogi_A_59 | 1ogi | A | AC1FAD BINDING SITE FOR CHAIN A | Y - 79 |
1ogi_A_59 | 1ogi | A | AC1FAD BINDING SITE FOR CHAIN A | S - 80 |
Clusters included in this Subclass |
CLUSTER: HA.12.6 |